QuartPAC

This package is for version 3.16 of Bioconductor; for the stable, up-to-date release version, see QuartPAC.

Identification of mutational clusters in protein quaternary structures.

Bioconductor version: 3.16

Identifies clustering of somatic mutations in proteins over the entire quaternary structure.

Author: Gregory Ryslik, Yuwei Cheng, Hongyu Zhao

Maintainer: Gregory Ryslik <gregory.ryslik at yale.edu>

Citation (from within R, enter citation("QuartPAC")):

To install this package, start R (version "4.2") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("QuartPAC")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("QuartPAC")

SpacePAC: Identifying mutational clusters in 3D protein space using simulation	PDF	R Script
Reference Manual	PDF
NEWS	Text

biocViews	Clustering, Proteomics, Software, SomaticMutation
Version	1.30.0
In Bioconductor since	BioC 3.1 (R-3.2) (9 years)
License	GPL-2
Depends	iPAC, GraphPAC, SpacePAC, data.table
Imports
System Requirements
URL

Follow Installation instructions to use this package in your R session.

Source Package	QuartPAC_1.30.0.tar.gz
Windows Binary	QuartPAC_1.30.0.zip
macOS Binary (x86_64)	QuartPAC_1.30.0.tgz
macOS Binary (arm64)	QuartPAC_1.30.0.tgz
Source Repository	git clone https://git.bioconductor.org/packages/QuartPAC
Source Repository (Developer Access)	git clone git@git.bioconductor.org:packages/QuartPAC
Bioc Package Browser	https://code.bioconductor.org/browse/QuartPAC/
Package Short Url	https://bioconductor.org/packages/QuartPAC/
Package Downloads Report	Download Stats
Old Source Packages for BioC 3.16	Source Archive