c9b70d0505c1afcabbaba687d29052b5 *DESCRIPTION
4f15d88d43db5bc0963772c8974c558e *LICENSE
f731e6b125a85e8ca927b82fe764d30e *NAMESPACE
3d55985977e65e4ce6325540977c971f *NEWS.md
2533640f5f5f96bc3fc32b75221e7265 *R/SCISSOR.R
846f583110fa259d4344eef314feb5b1 *R/data.R
94097a1abd8a9b249575ddf27d8003ea *R/data_QC.R
72f2c6d9024e1c6e32dd2dc09dfe27e2 *R/data_gen.R
67c35c114c53821362907a1adf7cf0f2 *R/data_prep.R
ffc6b56c7798501968937e4c100ff0c4 *R/misc.R
8e5672494455b29da978031e01e107de *R/plot_shape.R
c7dda54f1ba529e92e628826581adc42 *build/vignette.rds
4d2a8dbea9f9b4278a62dfb043246e1e *data/TOY_mrna_mat.rda
70dd586eb451971d457ee713dca17649 *data/TOY_mrna_se.rda
241791ecbf836c1840751c173fbfcd92 *data/TOY_total_mat.rda
009d3a1be6350e768d2371557e77705b *data/TOY_total_se.rda
ffa792a230d4664ed2253c61023b474c *inst/bash/sbatch_pergene.sh
78933d2d08aa8d758ff60cab0ee3930e *inst/bash/submit_pergene.sh
8d5851fa7cb5ea1dc2b4e5626c189f10 *inst/doc/RNAshapeQC_intro.R
34d786195f002650f198d56e01a2f909 *inst/doc/RNAshapeQC_intro.Rmd
0f1589f9ce9111cb5d31db09bf290a97 *inst/doc/RNAshapeQC_intro.html
a287578e14c352d7e3f3564cf0c67a99 *man/TOY_mrna_mat.Rd
ec4e989fa22e60f5dc5c00d692818040 *man/TOY_mrna_se.Rd
8f60c8525b17a026c4720e569a77ff37 *man/TOY_total_mat.Rd
9b64efb0900a468a19ad025768dcee71 *man/TOY_total_se.Rd
e5d6dea4dfa819f0639932af4f3024f7 *man/combine_vecObj.Rd
99b6b4386b3ad6d4ca1ee5c3a67ba602 *man/compute_DIIwt.Rd
6f99a349ad8bcc0a2d86c82189e2036b *man/compute_DR.Rd
a7082b1870a0d546054751e3f9ccbb49 *man/compute_MCD.Rd
c87604588b0ad65bce8240db8d8ea574 *man/compute_SOI.Rd
b467fbdf03de5cb5494740bf6e8b83a6 *man/compute_wCV.Rd
416a44308fb9077cf456fd9e9c09bb87 *man/construct_pileup.Rd
04182a9b09f6dd99cfd916f24c6b4c7a *man/dot-build_pileupExon.Rd
11050cf51841320a8f9ae3d3f85006d5 *man/extract_RData.Rd
1919e4aa6b4292fc999535867936b2fc *man/filter_lowExpGenes.Rd
409a748d0c39f9086d7f2174356a37c2 *man/gen_DR.Rd
edebea17fc4a2377ba93d474be37e060 *man/gen_MCD.Rd
41c09596b80b07164d24d54440cb8070 *man/gen_wCV.Rd
d5ec76bd53c56459edb7b4cf608dd121 *man/get_DIIhc.Rd
86bff2c18bcbc3ec6c2515851e63fb68 *man/get_DIIwt.Rd
16b7789af3c4fb5f55f4b2185c4643a2 *man/get_DR.Rd
70ce96bb11d617b677a731866884f4eb *man/get_MCD.Rd
43a4a2ebe38294bb972cb65bf618d031 *man/get_SOI.Rd
609f91ad736d5a9f8ef6f4a3f021f50d *man/get_pileupExon.Rd
7171ca508ce78929876b822e1fbaba4c *man/get_wCV.Rd
c02a6f8eb98de85b135f71ecf9434a8f *man/plot_DIIwt.Rd
7a5fc74e96a2ca8af84ac01985679008 *man/plot_GBC.Rd
948e0a411ec8f1422486971951ca596b *man/plot_GBCos.Rd
3cbec46871e6840a09f511c0502b0452 *man/plot_SOI.Rd
34d786195f002650f198d56e01a2f909 *vignettes/RNAshapeQC_intro.Rmd
