88e3ecc671313f6ae51e2db5154214fb *DESCRIPTION
6b70b32489d3021c2bab7ad063cb9c13 *NAMESPACE
ad1e62c9b5557420afb821dcb8c3a31b *NEWS.md
02f8c27ac7fe268513f41a3db75ebd71 *R/dist2clusters.R
02a4a0912576e6f218754e5ad5b64519 *R/dist2tree.R
ad516435bc95e55086cf77890a696813 *R/fasta2dist.R
df6cc46bc7fae1a55b713f3d5065b35a *R/fastreeR-package.R
bfd34634a6c66afb53eb5acded16b877 *R/tree2clusters.R
6f33a3f1b0c67264584ca3e404a97b42 *R/vcf2clusters.R
34f6431245e15032cc3664aa914a45e1 *R/vcf2dist.R
f56daae66c26d1ebe8fd86b7666ca24a *R/vcf2istats.R
068b6a47488a9ab321dec9d153839fa5 *R/vcf2tree.R
a16ead4a1c49c34c374d62ae975ea2c0 *R/zzz.R
6520d57a870b2770455ab36221294b64 *README.md
533839446f70bde34a1050627ce80586 *build/partial.rdb
5b5368d19e950263328dfade9046077f *build/vignette.rds
3be180b3c4d480cfa92541ac39cbeaaf *inst/CITATION
bacd1443422cf8b1b5c4b4f1104c36e8 *inst/WORDLIST
728e28334be4b5216787fec4a98bec6f *inst/doc/fastreeR_vignette.R
9c556cc24c1caf624c82f44aa8c27521 *inst/doc/fastreeR_vignette.Rmd
735b27a996b104dcdf07058f2fec8739 *inst/doc/fastreeR_vignette.html
c72a4b339ce06696bdbba3d691908da3 *inst/extdata/samples.fasta.dist.gz
44f8fc5a9ee2ee48d6daa6865f67d9f0 *inst/extdata/samples.fasta.gz
2ed513f6de444b1482633b3e8792815c *inst/extdata/samples.vcf.dist.gz
e7166d30be87bf13a5fce7d7732ba1a9 *inst/extdata/samples.vcf.gz
4c03eb5866f0483e84dba53a7e23ad9c *inst/extdata/samples.vcf.istats
4147250e9fabaafd5df4e14097980ea1 *inst/java/BioInfoJavaUtils-2.7.1.jar
ddd5eb3a035655cbbb536e9b86907a00 *inst/java/bzip2-0.9.1.jar
c350dc0db8aa038e6bbaf0050720d69c *inst/java/jcommander-1.82.jar
8fc4d4e0129244f9fd39650c5f30feb2 *inst/java/trove4j-3.0.3.jar
56e3fd256e5423a74393bd5eaa5302bb *inst/java/xz-1.10.jar
76aee6d10957186aa8ee849a54b6ea32 *inst/script/fastreeR_sample_data.md
93fb9c2e3ed61f9413d4cdcab1bb8e53 *man/dist2clusters.Rd
859fa7c59a256f92a2f6ae44c23f5293 *man/dist2tree.Rd
e7baa4f8efc75cce90ca288889a48fe2 *man/fasta2dist.Rd
222b3c2e63d1f30d4ecdf210cd8f82d7 *man/fastreeR-package.Rd
107e8df51d01fa08dfb740e0937e8378 *man/tree2clusters.Rd
5d1adde809cd445aec1e69cb3aa80fd9 *man/vcf2clusters.Rd
0c926c00285b23eab9c97ee391cc4c70 *man/vcf2dist.Rd
a7e2f42e07dd115dee53409844857d7a *man/vcf2istats.Rd
0b9bd663ece62faa9ce0f45dba9d1cfa *man/vcf2tree.Rd
66d04be4407fc271133dfcf198afe7ed *tests/spelling.R
9b375dc81ea994c2245acceb9f318a6c *tests/testthat.R
72e1fc5b0523ee7134e2bb04efe9baf9 *tests/testthat/helper_fastreeR.R
a47506c9ae829178c13f57b2d6c93a39 *tests/testthat/test_dist2clusters.R
21a0dab6e6bdf73540133741dee7581a *tests/testthat/test_dist2tree.R
5def0464c0d9986e7e6273e740af162b *tests/testthat/test_fasta2dist.R
83a42c6148e27c13357002a0a0e24f7a *tests/testthat/test_tree2clusters.R
0c5b20d5a5fff8c23d9cd6c1413d1b1a *tests/testthat/test_vcf2clusters.R
ce9cfa2ca9d79f28e442f8f9f0acd9ce *tests/testthat/test_vcf2dist.R
de4484a610e66815796fd2bd353a5b94 *tests/testthat/test_vcf2istats.R
5ae72b35e99ab98c91256898f85293e9 *tests/testthat/test_vcf2tree.R
f6675e175033964065820742e1e0292d *tests/testthat/test_vcf2tree_bootstrap.R
9c556cc24c1caf624c82f44aa8c27521 *vignettes/fastreeR_vignette.Rmd
