08530f7c5788bffc7d8161b65508f7cd *DESCRIPTION
c9091d1c6529bd030c03a1fefd67ddeb *NAMESPACE
72b0fe00fe39a4aedb3963c50c13d3e7 *NEWS.md
642e8e9594cdd228224c98bf67b301f6 *R/AllClasses.R
e7b36b9ff06318c0e347128898d35fcc *R/AllGenerics.R
7ea445f4c6228ab714af3b9d37fee3d5 *R/add_pairdist.R
5e28bb58040f2d38bfa2404a92743814 *R/anchor.R
0a58a4ea6388b574e2fb1e39cfdf2f18 *R/annotate.R
2bbe9db60acf82dbb2d297bd5284d8e8 *R/arrange.R
a2fb958d03c5ab2263e7e4d2a229610f *R/attach.R
62e8c86b8abaf1aefac268db67cc1505 *R/count-overlaps.R
e78ce00553e108ccec5f9fc2d5e46bf4 *R/count.R
c5b25f355d9a3f2f8a0887d90f94f934 *R/data.R
2e701c414ea3dc7889f13d76141ed3e1 *R/export.R
9ab1dad261da1874b72a4ee7eea46208 *R/filter-overlaps.R
1bd999d735633ccdeff1574d429a3da8 *R/filter.R
2dd6d74be318ed17423c111cc43b5f88 *R/find-overlaps.R
7b1245197b04cf7be64756bea9f7cbc7 *R/flank.R
52d12c92b2a5db9fc515b726546cc1a4 *R/ginteractions-construct.R
f3823cf574585c8269b2702e05c0e01e *R/ginteractions-env.R
61f8714e4e5761938b9734edab2c5015 *R/ginteractions-getters.R
98f1fff0b7ff5af9894009cd16dcd181 *R/ginteractions-scoping.R
f44f13a1a631245a947ba8338a808511 *R/ginteractions-setters.R
f36d1a18126c79cac640a24f13fd4c99 *R/group_by.R
ba4b32257de5bed987b59c443fff21f2 *R/group_data.R
8fbd8613a122b6dc29f7b3fd8bc60cc9 *R/internals.R
7151be1d23d507d210b3c4eb7c42396f *R/join-overlap-left.R
b44e6b7bca427f177cc4f194578a2fb2 *R/methods-AnchoredPinnedGInteractions.R
7c00f58213dffdb62f53974143fbf37c *R/methods-DelegatingGInteractions.R
f8f04c3e5bdc80c037f8dd62e19960f3 *R/methods-GroupedGInteractions.R
69a548cac3ddce56d32a940b8fd0cd06 *R/methods-PinnedGInteractions.R
590751cfc67fce44d45303d8879c13fc *R/methods-show.R
da9ff400ef25ef68cba967ce936c2568 *R/mutate.R
0efcd3252b82835d4fb9101a408d4cc2 *R/pair-granges.R
3f5c7e37f8efcb519d0d53669b09f5cd *R/pin.R
8f75675a5160055f0e5ee584bfd7a59a *R/plyinteractions.R
73c56b0418160090b597f4b71f532ed8 *R/rename.R
935d7e9dd000dfb0cf41cb76956ae2ff *R/replace-anchors.R
b5ba57bd5304f872806aae6b6c851e10 *R/select.R
ef43ce42a169398e38869870b2b587a1 *R/shift.R
e240b7345466c5cff0bd35130872ad3e *R/slice.R
274ec630d29d2846ba457fdb959c0c46 *R/stretch.R
140756836f19f458bc919a35d2d9469e *R/summarize.R
f1e8cd51f0f2ff034309bdebfa26a5d1 *R/tbl_vars.R
132d54612cac748e63c79d25ec571737 *R/zzz.R
6c8ed00a304e64f7cb8c624366a3caa5 *README.md
22c378f4f4e8a43acce96684e8163fad *build/vignette.rds
45cf8906a9c85930e1e32b5fd682b3ab *data/GM12878_HiCCUPS.rda
d912604b8200da778ecd70629e3dd2dc *data/ce10_ARCC.rda
e336af6a19c54b9e45e7e13b894d17b8 *data/ce10_REs.rda
67009641b7cd531fdcda388549d421a5 *inst/doc/plyinteractions.R
0587892b6f6d14020b48db6bf5fb86d7 *inst/doc/plyinteractions.Rmd
b65b643b277eca24a5b6022a34d0910e *inst/doc/plyinteractions.html
f62b215e6d37d7d227ca9d7e2a37a69e *inst/doc/process_pairs.R
23e4f7dd4af3a49f3b1850dbdcc4c317 *inst/doc/process_pairs.Rmd
f9d55e653ae4d6863bdd559df68efbbc *inst/doc/process_pairs.html
643c5d27c6d514e900f7be8c729fff45 *inst/extdata/pairs.gz
6706951a0d6c1f892cac2ccc6ffea25d *inst/scripts/GM12878_HiCCUPS.R
1cb80874931a0da113f5b59181e4bbb3 *inst/scripts/ce10_ARCC.R
25bd5975cd6e5d0df84bbcffd71567f4 *inst/scripts/ce10_REs.R
d7f5cd339686197dc3c37c0338ee652e *inst/scripts/pairs.gz.R
3e86cd85b2f089b4915566c431f799f2 *man/add-pairdist.Rd
aefa4283797cc1916fce2e7d601bb159 *man/delegating-ginteractions-methods.Rd
45423368fa916291df087f4845056855 *man/dplyr-arrange.Rd
8f09c87e40a953880f63b99e2e92f757 *man/dplyr-count.Rd
a117dd4665bd73455b034a259689027f *man/dplyr-filter.Rd
8d53e2d46aab22073c2ae593091aacfc *man/dplyr-group_by.Rd
648e0f1c7f9de25c52d6ee814b11bf5f *man/dplyr-mutate.Rd
41b93f0c05d6c862ca945fee57b259b9 *man/dplyr-rename.Rd
cf20ae0b2ba1f7ed3ab77428946b80bd *man/dplyr-select.Rd
b449e019ae5d50401349daea9a88f932 *man/dplyr-slice.Rd
9bf6a59c8c1c09a04ce0d0094c0dc3a9 *man/dplyr-summarize.Rd
7257d2463260b1912749e777c4f10ec9 *man/figures/classes.png
c3f7d88ea3488593fd8b81ef6aede07e *man/figures/ginteractions.png
1f7be9d552971f9a1bfb74451263ed60 *man/figures/logo.png
333b6f1abce1de387c0a76f38e556365 *man/figures/pinnedginteractions.png
216ff27b9b0a44fce16c7265747ad5fc *man/figures/stretch.png
87fcc6a6a0c5674a5deb13684a81d4a1 *man/ginteractions-anchor.Rd
cf8c56f6493290192f5fa3cb759a62a2 *man/ginteractions-annotate.Rd
44dbd58e436ce176e601ed9665d69c48 *man/ginteractions-construct.Rd
05b3a2c87eac5955d77db9c3aab9d079 *man/ginteractions-count-overlaps.Rd
4fcbcd2150828a7381dae9b87a23fa4e *man/ginteractions-export.Rd
5c90e47e4fd399e695e2f1b53b3c90ce *man/ginteractions-filter-overlaps.Rd
e01e2b5c15bbdc32422e3cc25d3b2b57 *man/ginteractions-find-overlaps.Rd
e9b76763bca4d79068e422ef34cf2441 *man/ginteractions-getters.Rd
0fde8bf8662eb678de6d1f81d5518011 *man/ginteractions-join-overlap-left.Rd
3be49062febe51e0fdef76cedd1523b1 *man/ginteractions-pin.Rd
c099ad5b1bc55078fc53e877e93be856 *man/ginteractions-setters.Rd
d62a4b88156862e9d75df365a98aab0f *man/group-group_data.Rd
28caeeeb48390c94167f1d32717bb20c *man/pair-granges.Rd
3ce2f6aa6953cdd21e15f3f066b60455 *man/plyinteractions-data.Rd
65e925941d4b9c8b7abf60a264f9bab8 *man/plyinteractions-flank.Rd
330f2357c46f49f5a36e369e34e34100 *man/plyinteractions-package.Rd
53b924d048544bb45a45f28c92253f4b *man/plyinteractions-shift.Rd
40571d7c8a6fcf5b41097bef3417b516 *man/plyranges-stretch.Rd
47168e992c92e1ab2ce28e791e4b4cf1 *man/replace_anchors.Rd
534297c85d6526a43ac566c274d9c598 *man/show-GInteractions.Rd
62d82163effbd3b71761453ca3e320e4 *tests/testthat.R
5a002d1e715e7557efe9f2eca1683b79 *tests/testthat/setup.R
15fe53a0c3f84c2a306b44bd2067918c *tests/testthat/test-anchors.R
b31a7c6f37f5951a726c83a0c9895cb3 *tests/testthat/test-classes.R
54e03dc70a9f81082f5d3dd6e7e61cf0 *tests/testthat/test-dplyr.R
e1746fd183e14f5d3d775ab0daa48006 *tests/testthat/test-enrich.R
f14bc329e53b3d464de38b95c978248b *tests/testthat/test-export.R
f09302e23730b56dbc6efda182cd597b *tests/testthat/test-getters.R
a4c78058285424b60769ec89f7f95898 *tests/testthat/test-overlaps.R
1aa4a7b65a03498e9e345e6d1d2d79cc *tests/testthat/test-plyranges.R
155fafefd342957c5ade661dd4c6e249 *tests/testthat/test-setters.R
0587892b6f6d14020b48db6bf5fb86d7 *vignettes/plyinteractions.Rmd
23e4f7dd4af3a49f3b1850dbdcc4c317 *vignettes/process_pairs.Rmd
