BAGS
This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see BAGS.
A Bayesian Approach for Geneset Selection
Bioconductor version: 3.6
R package providing functions to perform geneset significance analysis over simple cross-sectional data between 2 and 5 phenotypes of interest.
Author: Alejandro Quiroz-Zarate
Maintainer: Alejandro Quiroz-Zarate <aquiroz at jimmy.harvard.edu>
Citation (from within R, enter
citation("BAGS")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("BAGS")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("BAGS")| BAGS: A Bayesian Approach for Geneset Selection. | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Bayesian, Software |
| Version | 2.18.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
| License | Artistic-2.0 |
| Depends | R (>= 2.10), breastCancerVDX, Biobase |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
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| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | BAGS_2.18.0.tar.gz |
| Windows Binary | BAGS_2.18.0.zip (32- & 64-bit) |
| Mac OS X 10.11 (El Capitan) | BAGS_2.18.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/BAGS |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/BAGS |
| Package Short Url | https://bioconductor.org/packages/BAGS/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |