ProCoNA
This package is for version 3.6 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see ProCoNA.
Protein co-expression network analysis (ProCoNA).
Bioconductor version: 3.6
Protein co-expression network construction using peptide level data, with statisical analysis. (Journal of Clinical Bioinformatics 2013, 3:11 doi:10.1186/2043-9113-3-11)
Author: David L Gibbs
Maintainer: David L Gibbs <gibbsd at ohsu.edu>
citation("ProCoNA")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("ProCoNA")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("ProCoNA")| De Novo Peptide Network Example | R Script | |
| Reference Manual | ||
| README | Text | |
| NEWS | Text |
Details
| biocViews | GraphAndNetwork, Proteomics, Software |
| Version | 1.16.0 |
| In Bioconductor since | BioC 2.13 (R-3.0) (10.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.10), methods, WGCNA, MSnbase, flashClust |
| Imports | BiocGenerics, GOstats |
| System Requirements | |
| URL |
See More
| Suggests | RUnit |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | ProCoNA_1.16.0.tar.gz |
| Windows Binary | ProCoNA_1.16.0.zip |
| Mac OS X 10.11 (El Capitan) | ProCoNA_1.16.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/ProCoNA |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/ProCoNA |
| Package Short Url | https://bioconductor.org/packages/ProCoNA/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |