factDesign
This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see factDesign.
Factorial designed microarray experiment analysis
Bioconductor version: 3.6
This package provides a set of tools for analyzing data from a factorial designed microarray experiment, or any microarray experiment for which a linear model is appropriate. The functions can be used to evaluate tests of contrast of biological interest and perform single outlier detection.
Author: Denise Scholtens
Maintainer: Denise Scholtens <dscholtens at northwestern.edu>
citation("factDesign")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("factDesign")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("factDesign")| factDesign | R Script | |
| Reference Manual |
Details
| biocViews | DifferentialExpression, Microarray, Software |
| Version | 1.54.0 |
| In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19 years) |
| License | LGPL |
| Depends | Biobase(>= 2.5.5) |
| Imports | stats |
| System Requirements | |
| URL |
See More
| Suggests | affy, genefilter, multtest |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | factDesign_1.54.0.tar.gz |
| Windows Binary | factDesign_1.54.0.zip |
| Mac OS X 10.11 (El Capitan) | factDesign_1.54.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/factDesign |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/factDesign |
| Package Short Url | https://bioconductor.org/packages/factDesign/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |