maSigPro
This package is for version 3.6 of Bioconductor; for the stable, up-to-date release version, see maSigPro.
Significant Gene Expression Profile Differences in Time Course Gene Expression Data
Bioconductor version: 3.6
maSigPro is a regression based approach to find genes for which there are significant gene expression profile differences between experimental groups in time course microarray and RNA-Seq experiments.
Author: Ana Conesa <aconesa at cipf.es>, Maria Jose Nueda <mj.nueda at ua.es>
Maintainer: Maria Jose Nueda <mj.nueda at ua.es>
citation("maSigPro")):
Installation
To install this package, start R (version "3.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("maSigPro")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("maSigPro")| maSigPro Vignette | |
| maSigProUsersGuide.pdf | |
| Reference Manual |
Details
| biocViews | Differential Expression, Microarray, RNA-Seq, Software, TimeCourse |
| Version | 1.50.0 |
| In Bioconductor since | BioC 1.7 (R-2.2) (18.5 years) |
| License | GPL (>= 2) |
| Depends | R (>= 2.3.1) |
| Imports | Biobase, graphics, grDevices, venn, mclust, stats, MASS |
| System Requirements | |
| URL | http://bioinfo.cipf.es/ |
See More
| Suggests | |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | oneChannelGUI |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | maSigPro_1.50.0.tar.gz |
| Windows Binary | maSigPro_1.50.0.zip |
| Mac OS X 10.11 (El Capitan) | maSigPro_1.50.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/maSigPro |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/maSigPro |
| Package Short Url | https://bioconductor.org/packages/maSigPro/ |
| Package Downloads Report | Download Stats |
| Old Source Packages for BioC 3.6 | Source Archive |