DoReMiTra
This is the development version of DoReMiTra; to use it, please install the devel version of Bioconductor.
Orchestrating Blood Radiation Transcriptomic Data
Bioconductor version: Development (3.22)
DoReMiTra is an R data package providing access to curated transcriptomic datasets related to blood radiation, with a focus on neutron, x-ray, and gamma ray studies. It is designed to facilitate radiation biology research and support data exploration and reproducibility in radiation transcriptomics. All datasets are provided as SummarizedExperiment objects, allowing seamless integration with the Bioconductor ecosystem.
Author: Ahmed Salah [aut, cre]
, Federico Marini [aut]
Maintainer: Ahmed Salah <ahhassan at uni-mainz.de>
citation("DoReMiTra")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("DoReMiTra")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("DoReMiTra")| The DoReMiTra User's Guide | HTML | R Script |
| Reference Manual |
Details
| biocViews | ExperimentData, ExperimentHub, ExpressionData, GEO, PackageTypeData, RNASeqData |
| Version | 0.99.2 |
| License | MIT + file LICENSE |
| Depends | R (>= 4.5.0) |
| Imports | ExperimentHub, SummarizedExperiment, AnnotationHub, utils, glue, S4Vectors, scater |
| System Requirements | |
| URL | https://github.com/AhmedSAHassan/DoReMiTra |
| Bug Reports | https://github.com/AhmedSAHassan/DoReMiTra/issues |
See More
| Suggests | testthat (>= 3.0.0), knitr, rmarkdown, BiocStyle, DT |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | DoReMiTra_0.99.2.tar.gz |
| Windows Binary (x86_64) | |
| macOS Binary (x86_64) | |
| macOS Binary (arm64) | |
| Source Repository | git clone https://git.bioconductor.org/packages/DoReMiTra |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/DoReMiTra |
| Package Short Url | https://bioconductor.org/packages/DoReMiTra/ |
| Package Downloads Report | Download Stats |