HDF5NAdrop2matrix       Coerce a NA-dropped HDF5 matrix back to regular
                        matrix form where NAs are not dropped to 0.
cell_1                  cell_1
cell_2                  cell_2
cell_3                  cell_3
poolData                Pool single-cell file together into an
                        HDF5-based SummarizedExperiment object with
                        sparse matrix representation.
regionSummary           Compute regional methylation information for
                        individual cells.
toy.gr                  toy.gr
toy.results             toy.results
tpEstimate              Estimate transition probilities conditioning on
                        CpG-CpG distance
tpPlot                  Plot transition probability distribution
vmrseqFit               Construct candidate regions and detect variably
                        methylated regions.
vmrseqOptimControl      Auxiliary function as user interface for vmrseq
                        optimization.
vmrseqSmooth            Smoothing on single-cell bisulfite sequencing
                        data for the purpose of constructing candidate
                        regions.
