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Package: twilight |
Version: 1.8.0 |
Command: /home/biocbuild/arch/sparc/R-2.3.0/bin/R CMD build twilight |
RetCode: 1 |
Time: 52.8 seconds |
Status: ERROR |
PackageFile: None |
* checking for file 'twilight/DESCRIPTION' ... OK * preparing 'twilight': * checking DESCRIPTION meta-information ... OK * cleaning src * checking whether 'INDEX' is up-to-date ... OK * installing the package to re-build vignettes * Installing *source* package 'twilight' ... ** libs gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c confidence.line.c -o confidence.line.o gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c correlation.c -o correlation.o gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c kstest.c -o kstest.o gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c sep.c -o sep.o gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c twosample.perm.c -o twosample.perm.o gcc -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/home/biocbuild/arch/sparc/R-2.3.0/include -I/usr/local/include -fPIC -g -O2 -std=gnu99 -Wall -c twosample.single.c -o twosample.single.o gcc -G -L/usr/local/lib -o twilight.so confidence.line.o correlation.o kstest.o sep.o twosample.perm.o twosample.single.o ** R ** data ** inst ** preparing package for lazy loading Loading required package: splines ** help >>> Building/Updating help pages for package 'twilight' Formats: text html latex example exfdr text html latex expval text html latex plot.twilight text html latex example print.twilight text html latex example twilight text html latex example twilight.combi text html latex example twilight.filtering text html latex example twilight.getlambda text html latex twilight.getmatrix text html latex twilight.permute.pair text html latex twilight.permute.unpair text html latex twilight.pval text html latex example twilight.teststat text html latex example ** building package indices ... * DONE (twilight) * creating vignettes ... ERROR Welcome to Bioconductor Vignettes contain introductory material. To view, type 'openVignette()' or start with 'help(Biobase)'. For details on reading vignettes, see the openVignette help page. Warning message: unable to open connection to X11 display '' Error: chunk 10 Error in X11(paste("png::", filename, sep = ""), width, height, pointsize, : unable to start device PNG Error in buildVignettes(dir = ".") : Error: chunk 10 Error in X11(paste("png::", filename, sep = ""), width, height, pointsize, : unable to start device PNG Execution halted