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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/BRGenomics_1.6.0.tar.gz && rm -rf BRGenomics.buildbin-libdir && mkdir BRGenomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=BRGenomics.buildbin-libdir BRGenomics_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL BRGenomics_1.6.0.zip && rm BRGenomics_1.6.0.tar.gz BRGenomics_1.6.0.zip
###
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100  589k  100  589k    0     0   685k      0 --:--:-- --:--:-- --:--:--  684k

install for i386

* installing *source* package 'BRGenomics' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'BRGenomics'
    finding HTML links ... done
    BRGenomics-package                      html  
    PROseq-data                             html  
    applyNFsGRanges                         html  
    binNDimensions                          html  
    bootstrap-signal-by-position            html  
    genebodies                              html  
    getCountsByPositions                    html  
    getCountsByRegions                      html  
    getDESeqDataSet                         html  
    getDESeqResults                         html  
    getMaxPositionsBySignal                 html  
    getPausingIndices                       html  
    getSpikeInCounts                        html  
    getSpikeInNFs                           html  
    getStrandedCoverage                     html  
    import-functions                        html  
    import_bam                              html  
    intersectByGene                         html  
    makeGRangesBRG                          html  
    mergeGRangesData                        html  
    mergeReplicates                         html  
    subsampleBySpikeIn                      html  
    subsampleGRanges                        html  
    subsetRegionsBySignal                   html  
    tidyChromosomes                         html  
    txs_dm6_chr4                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'BRGenomics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'BRGenomics' as BRGenomics_1.6.0.zip
* DONE (BRGenomics)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'BRGenomics' successfully unpacked and MD5 sums checked