############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/DOSE_3.20.1.tar.gz && rm -rf DOSE.buildbin-libdir && mkdir DOSE.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DOSE.buildbin-libdir DOSE_3.20.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL DOSE_3.20.1.zip && rm DOSE_3.20.1.tar.gz DOSE_3.20.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 19 6158k 19 1228k 0 0 1439k 0 0:00:04 --:--:-- 0:00:04 1438k 59 6158k 59 3688k 0 0 1993k 0 0:00:03 0:00:01 0:00:02 1993k 100 6158k 100 6158k 0 0 2379k 0 0:00:02 0:00:02 --:--:-- 2380k install for i386 * installing *source* package 'DOSE' ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DOSE' finding HTML links ... done DOSE-package html DataSet html EXTID2NAME html GSEA_internal html clusterSim html compareClusterResult-class html computeIC html doSim html enrichDGN html enrichDGNv html enrichDO html enrichNCG html enrichResult-class html enricher_internal html gene2DO html geneID html geneInCategory html geneSim html gseDGN html gseDO html gseNCG html gseaResult-class html gsfilter html mclusterSim html parse_ratio html rebuildAnnoData html reexports html setReadable html show-methods html simplot html summary-methods html theme_dose html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DOSE' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'DOSE' as DOSE_3.20.1.zip * DONE (DOSE) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'DOSE' successfully unpacked and MD5 sums checked