############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/GenomicDistributions_1.2.0.tar.gz && rm -rf GenomicDistributions.buildbin-libdir && mkdir GenomicDistributions.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GenomicDistributions.buildbin-libdir GenomicDistributions_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL GenomicDistributions_1.2.0.zip && rm GenomicDistributions_1.2.0.tar.gz GenomicDistributions_1.2.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 7 3856k 7 276k 0 0 460k 0 0:00:08 --:--:-- 0:00:08 460k 37 3856k 37 1444k 0 0 914k 0 0:00:04 0:00:01 0:00:03 913k 91 3856k 91 3512k 0 0 1361k 0 0:00:02 0:00:02 --:--:-- 1361k 100 3856k 100 3856k 0 0 1427k 0 0:00:02 0:00:02 --:--:-- 1427k install for i386 * installing *source* package 'GenomicDistributions' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'GenomicDistributions' finding HTML links ... done BSdtToGRanges html GenomicDistributions html TSS_hg19 html binBSGenome html binChroms html binRegion html calcChromBins html calcChromBinsRef html calcCumulativePartitions html calcCumulativePartitionsRef html calcDinuclFreq html calcDinuclFreqRef html calcExpectedPartitions html calcExpectedPartitionsRef html calcFeatureDist html calcFeatureDistRefTSS html calcGCContent html calcGCContentRef html calcNeighborDist html calcOpenSignal html calcPartitions html calcPartitionsRef html calcWidth html cellTypeMetadata html chromSizes_hg19 html dot-requireAndReturn html dot-validateInputs html dtToGr html dtToGrInternal html exampleOpenSignalMatrix_hg19 html geneModels_hg19 html genomePartitionList html getChromSizes html getChromSizesFromFasta html getGeneModels html getGeneModelsFromGTF html getGenomeBins html getReferenceData html getTssFromGTF html grToDt html labelCuts html loadBSgenome html loadEnsDb html neighbordt html nlist html plotChromBins html plotCumulativePartitions html plotDinuclFreq html plotExpectedPartitions html plotFeatureDist html plotGCContent html plotNeighborDist html plotOpenSignal html plotPartitions html plotQTHist html retrieveFile html setB_100 html splitDataTable html theme_blank_facet_label html vistaEnhancers html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'GenomicDistributions' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'GenomicDistributions' as GenomicDistributions_1.2.0.zip * DONE (GenomicDistributions) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'GenomicDistributions' successfully unpacked and MD5 sums checked