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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/MOMA_1.6.0.tar.gz && rm -rf MOMA.buildbin-libdir && mkdir MOMA.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MOMA.buildbin-libdir MOMA_1.6.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL MOMA_1.6.0.zip && rm MOMA_1.6.0.tar.gz MOMA_1.6.0.zip
###
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100 4071k  100 4071k    0     0  1266k      0  0:00:03  0:00:03 --:--:-- 1265k

install for i386

* installing *source* package 'MOMA' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MOMA'
    finding HTML links ... done
    Moma-class                              html  
    areaEnrich                              html  
    associateEvents                         html  
    checkGeneMap                            html  
    checkList                               html  
    checkMAE                                html  
    checkPathways                           html  
    clusterRange                            html  
    clusterReliability                      html  
    cnvScoreStouffer                        html  
    conditionalModel                        html  
    conditionalP                            html  
    empiricalP                              html  
    example.gbm.mae                         html  
    fitCurvePercent                         html  
    gbm.pathways                            html  
    gene.map                                html  
    genomicPlotSmall                        html  
    getCoverage                             html  
    getDataFrame                            html  
    getDiggitEmpiricalQvalues               html  
    getEmpiricalQvals                       html  
    getPvalsMatrix                          html  
    getSubtypeEventTables                   html  
    integrateFunction                       html  
    integrateTZ                             html  
    makeCoverageDf                          html  
    makeSaturationPlots                     html  
    mapEntrez                               html  
    mapHugo                                 html  
    mapScoresCnvBand                        html  
    mergeData                               html  
    mergeDataBySubtype                      html  
    mergeGenomicSaturation                  html  
    mergeLists                              html  
    momaConstructor                         html  
    mutSig                                  html  
    oncoprintPlot                           html  
    pathwayDiggitIntersect                  html  
    plotEvents                              html  
    rea                                     html  
    reaNULL                                 html  
    sREA                                    html  
    sampleNameFilter                        html  
    sampleOverlap                           html  
    sigInteractorsDIGGIT                    html  
    stoufferIntegrate                       html  
    stoufferIntegrateDiggit                 html  
    subsetListInteractions                  html  
    validDiggitInteractions                 html  
    viperGetSigTFS                          html  
    viperGetTFScores                        html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MOMA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MOMA' as MOMA_1.6.0.zip
* DONE (MOMA)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'MOMA' successfully unpacked and MD5 sums checked