############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/RBioinf_1.54.0.tar.gz && rm -rf RBioinf.buildbin-libdir && mkdir RBioinf.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=RBioinf.buildbin-libdir RBioinf_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL RBioinf_1.54.0.zip && rm RBioinf_1.54.0.tar.gz RBioinf_1.54.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 12 3430k 12 426k 0 0 875k 0 0:00:03 --:--:-- 0:00:03 874k 63 3430k 63 2175k 0 0 1464k 0 0:00:02 0:00:01 0:00:01 1464k 100 3430k 100 3430k 0 0 1714k 0 0:00:02 0:00:02 --:--:-- 1715k install for i386 * installing *source* package 'RBioinf' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rinit.c -o Rinit.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rand.c -o rand.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RBioinf.buildbin-libdir/00LOCK-RBioinf/00new/RBioinf/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'RBioinf' finding HTML links ... done Rcal html S4Help html asSimpleVector html classList2Graph html computeClassLinearization html printWithNumbers html randDNA html simplePVect html simpleRand html simpleSort html subClassNames html superClasses html traceMethods html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'RBioinf' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c Rinit.c -o Rinit.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c rand.c -o rand.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o RBioinf.dll tmp.def Rinit.o rand.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/RBioinf.buildbin-libdir/RBioinf/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'RBioinf' as RBioinf_1.54.0.zip * DONE (RBioinf) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'RBioinf' successfully unpacked and MD5 sums checked