############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/tscR_1.6.1.tar.gz && rm -rf tscR.buildbin-libdir && mkdir tscR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=tscR.buildbin-libdir tscR_1.6.1.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL tscR_1.6.1.zip && rm tscR_1.6.1.tar.gz tscR_1.6.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 93 161k 93 151k 0 0 402k 0 --:--:-- --:--:-- --:--:-- 402k 100 161k 100 161k 0 0 428k 0 --:--:-- --:--:-- --:--:-- 427k install for i386 * installing *source* package 'tscR' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c tscR.c -o tscR.o "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c tscR_init.c -o tscR_init.o C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o tscR.dll tmp.def tscR.o tscR_init.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/tscR.buildbin-libdir/00LOCK-tscR/00new/tscR/libs/i386 ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'tscR' finding HTML links ... done combineCluster html frechetDist html frechetDistC html getClusters html importFromSE html imputeSenator-class html imputeSenatorToData html imputeSenators html plotCluster html plotClusterSenator html slopeDist html tscR html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'tscR' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c tscR.c -o tscR.o "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.14-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c tscR_init.c -o tscR_init.o C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o tscR.dll tmp.def tscR.o tscR_init.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.14-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.14-bioc/meat/tscR.buildbin-libdir/tscR/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'tscR' as tscR_1.6.1.zip * DONE (tscR) * installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library' package 'tscR' successfully unpacked and MD5 sums checked