############################################################################## ############################################################################## ### ### Running command: ### ### D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL SummarizedBenchmark ### ############################################################################## ############################################################################## * installing to library 'D:/biocbuild/bbs-3.15-bioc/R/library' * installing *source* package 'SummarizedBenchmark' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'SummarizedBenchmark' finding HTML links ... done BDData-class html BDData-setter html BDData-show html BDData html BDMethod-class html BDMethod-setter html BDMethod-show html BDMethod html BDMethodList-class html BDMethodList-setter html BDMethodList-show html BDMethodList html BenchDesign-class html BenchDesign-show html BenchDesign html SummarizedBenchmark-class html finding level-2 HTML links ... done SummarizedBenchmark html addMethod html addPerformanceMetric html allSB html assayNames-setter html availableMetrics html buildBench html compareBDData html compareBDMethod html compareBenchDesigns html dropMethod html estimateMetrics html expandMethod html groundTruths-setter html groundTruths html hashBDData html mcols-setter html modifyMethod html modmethod html performanceMetrics-setter html performanceMetrics html plotMethodsOverlap html plotROC html printMethod html sb html tdat html tidyBDMethod html tidyUpMetrics html updateBench html *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SummarizedBenchmark) Making 'packages.html' ... done