# ====================================================================
# Environment variables used on the Bioconductor build machines to
# control the behavior of R 4.3 for the BioC 3.17 builds
# ====================================================================
#
# BIOCONDUCTOR PACKAGE DEVELOPERS/MAINTAINERS: Please use the settings
# below on your machine when working on the master branch of your
# package. Also make sure to use a recent version of R 4.3. This
# should allow you to reproduce any error or warning you see on the
# Bioconductor build reports. The easiest way to use the settings
# below is to add them to your .Renviron file. However, please note
# that this will enable them for **any** R installation you have on
# your system. To enable them for a particular R session only, put
# them in a separate file (e.g. .Renviron.bioc, located in your home),
# then start R with:
#
#     R_ENVIRON_USER=~/.Renviron.bioc R
#
# or:
#
#     R_ENVIRON_USER=~/.Renviron.bioc R CMD build ...
#
# or:
#
#     R_ENVIRON_USER=~/.Renviron.bioc R CMD check ...
#
# Alternatively, if you have write access to the R_HOME folder, you
# can put them in R_HOME/etc/Renviron.site

#_R_CHECK_TIMINGS_="0"
_R_CHECK_EXECUTABLES_=false
_R_CHECK_EXECUTABLES_EXCLUSIONS_=false
_R_CHECK_LENGTH_1_CONDITION_=package:_R_CHECK_PACKAGE_NAME_,abort,verbose
_R_CHECK_LENGTH_1_LOGIC2_=package:_R_CHECK_PACKAGE_NAME_,abort,verbose
#_R_CHECK_LENGTH_1_CONDITION_=verbose
#_R_CHECK_LENGTH_1_LOGIC2_=verbose
_R_CHECK_S3_METHODS_NOT_REGISTERED_=true
#_R_S3_METHOD_LOOKUP_BASEENV_AFTER_GLOBALENV_=true
#_R_CLASS_MATRIX_ARRAY_=true
R_DEFAULT_INTERNET_TIMEOUT=600

# Package code can use this to detect that it's running on a Bioconductor
# build machine.
IS_BIOC_BUILD_MACHINE=true

# Set the number of workers that BiocParallel back-ends should use by default.
BIOCPARALLEL_WORKER_NUMBER=4

# Setting OMP_THREAD_LIMIT to 2 apparently helps prevent a BayesSpace
# TIMEOUT on Linux.
OMP_THREAD_LIMIT=2
# Setting **both** OMP_THREAD_LIMIT and OMP_NUM_THREADS to 2 apparently
# helps prevent a snifter TIMEOUT on Mac.
OMP_NUM_THREADS=2
# The KMP_* settings apparently help prevent a velociraptor TIMEOUT on Mac.
KMP_DEVICE_THREAD_LIMIT=2
KMP_TEAMS_THREAD_LIMIT=2