############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data muscat ### ############################################################################## ############################################################################## * checking for file ‘muscat/DESCRIPTION’ ... OK * preparing ‘muscat’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘analysis.Rmd’ using rmarkdown Quitting from lines 203-205 [umap] (analysis.Rmd) Error: processing vignette 'analysis.Rmd' failed with diagnostics: function 'as_cholmod_sparse' not provided by package 'Matrix' --- failed re-building ‘analysis.Rmd’ --- re-building ‘simulation.Rmd’ using rmarkdown Quitting from lines 168-171 [p_dd] (simulation.Rmd) Error: processing vignette 'simulation.Rmd' failed with diagnostics: sum(u$p_dd) == 1 is not TRUE --- failed re-building ‘simulation.Rmd’ SUMMARY: processing the following files failed: ‘analysis.Rmd’ ‘simulation.Rmd’ Error: Vignette re-building failed. Execution halted