############################################################################## ############################################################################## ### ### Running command: ### ### /home/hpages/bbs-3.18-bioc-R41/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome ### ############################################################################## ############################################################################## * checking for file ‘BSgenome/DESCRIPTION’ ... OK * preparing ‘BSgenome’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... OK * checking for LF line-endings in source and make files and shell scripts * checking for empty or unneeded directories WARNING: directory ‘BSgenome/inst/pkgtemplates/BSgenome_datapkg/inst/extdata’ is empty WARNING: directory ‘BSgenome/inst/pkgtemplates/MaskedBSgenome_datapkg/inst/extdata’ is empty * building ‘BSgenome_1.70.2.tar.gz’ Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L, : storing paths of more than 100 bytes is not portable: ‘BSgenome/inst/extdata/GentlemanLab/BSgenome.Gmellonella.NCBI.ASM364042v2-tools/fasta_to_sorted_2bit.R’ Warning in sprintf(gettext(fmt, domain = domain), ...) : one argument not used by format 'invalid uid value replaced by that for user 'nobody'' Warning: invalid uid value replaced by that for user 'nobody' Warning in sprintf(gettext(fmt, domain = domain), ...) : one argument not used by format 'invalid gid value replaced by that for user 'nobody'' Warning: invalid gid value replaced by that for user 'nobody'