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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MAGeCKFlute
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* checking for file ‘MAGeCKFlute/DESCRIPTION’ ... OK
* preparing ‘MAGeCKFlute’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MAGeCKFlute.Rmd’ using rmarkdown
2025-03-18 03:01:56.402 R[78941:301215949] XType: Using static font registry.
Warning: ggrepel: 5 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 8 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 3 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 5 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 9 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 4 unlabeled data points (too many overlaps). Consider increasing max.overlaps
--- finished re-building ‘MAGeCKFlute.Rmd’

--- re-building ‘MAGeCKFlute_enrichment.Rmd’ using rmarkdown

Quitting from MAGeCKFlute_enrichment.Rmd:103-110 [enrichplot]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `get()`:
! invalid first argument
---
Backtrace:
     ▆
  1. ├─ggtangle::cnetplot(hgtRes1, 5)
  2. └─enrichplot:::cnetplot.enrichResult(hgtRes1, 5)
  3.   ├─ggtangle::cnetplot(...)
  4.   └─ggtangle:::cnetplot.list(...)
  5.     ├─ggplot2::ggplot(g, layout = layout)
  6.     └─ggtangle:::ggplot.igraph(g, layout = layout)
  7.       └─ggtangle:::get_igraph_layout(layout)
  8.         └─yulab.utils::get_fun_from_pkg("igraph", layout)
  9.           └─utils::getFromNamespace(fun, pkg)
 10.             └─base::get(x, envir = ns, inherits = FALSE)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'MAGeCKFlute_enrichment.Rmd' failed with diagnostics:
invalid first argument
--- failed re-building ‘MAGeCKFlute_enrichment.Rmd’

SUMMARY: processing the following file failed:
  ‘MAGeCKFlute_enrichment.Rmd’

Error: Vignette re-building failed.
Execution halted