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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MAST
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* checking for file ‘MAST/DESCRIPTION’ ... OK
* preparing ‘MAST’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘MAITAnalysis.Rmd’ using rmarkdown
Warning: code chunks must not depend on the uncached chunk "data"
Warning: code chunks must not depend on the uncached chunk "zlm"
Warning: code chunks must not depend on the uncached chunk "boots"
--- finished re-building ‘MAITAnalysis.Rmd’

--- re-building ‘MAST-Intro.Rmd’ using rmarkdown

Quitting from MAST-Intro.Rmd:217-223 [tests]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `melt.default()`:
! The melt generic in data.table has been passed a matrix and will attempt to redirect to the relevant reshape2 method; please note that reshape2 is superseded and is no longer actively developed, and this redirection is now deprecated. To continue using melt methods from reshape2 while both packages are attached, e.g. melt.list, you can prepend the namespace, i.e. reshape2::melt(zlm.lr[, , "Pr(>Chisq)"]). In the next version, this warning will become an error.
---
Backtrace:
    ▆
 1. ├─ggplot2::ggplot(...)
 2. ├─data.table::melt(zlm.lr[, , "Pr(>Chisq)"])
 3. └─data.table:::melt.default(zlm.lr[, , "Pr(>Chisq)"])
 4.   └─data.table:::stopf(...)
 5.     └─data.table:::raise_condition(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'MAST-Intro.Rmd' failed with diagnostics:
The melt generic in data.table has been passed a matrix and will attempt to redirect to the relevant reshape2 method; please note that reshape2 is superseded and is no longer actively developed, and this redirection is now deprecated. To continue using melt methods from reshape2 while both packages are attached, e.g. melt.list, you can prepend the namespace, i.e. reshape2::melt(zlm.lr[, , "Pr(>Chisq)"]). In the next version, this warning will become an error.
--- failed re-building ‘MAST-Intro.Rmd’

--- re-building ‘MAST-interoperability.Rmd’ using rmarkdown
--- finished re-building ‘MAST-interoperability.Rmd’

SUMMARY: processing the following file failed:
  ‘MAST-Intro.Rmd’

Error: Vignette re-building failed.
Execution halted