############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MethReg ### ############################################################################## ############################################################################## * checking for file ‘MethReg/DESCRIPTION’ ... OK * preparing ‘MethReg’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘MethReg.Rmd’ using rmarkdown Quitting from MethReg.Rmd:334-345 [unnamed-chunk-9] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! vector memory limit of 64.0 Gb reached, see mem.maxVSize() --- Backtrace: ▆ 1. ├─MethReg::create_triplet_distance_based(...) 2. │ └─MethReg::get_region_target_gene(...) 3. │ └─MethReg:::get_distance_region_target(out, genome = genome) 4. │ └─MethReg::make_granges_from_names(names = region.target.info$regionID) 5. │ └─... %>% makeGRangesFromDataFrame() 6. ├─GenomicRanges::makeGRangesFromDataFrame(.) 7. ├─tidyr::separate(., col = ".", into = c("chr", "start", "end")) 8. └─tidyr:::separate.data.frame(...) 9. └─tidyr:::str_separate(...) 10. └─tidyr:::str_split_fixed(...) 11. └─tidyr:::simplifyPieces(pieces, n, fill == "left") ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'MethReg.Rmd' failed with diagnostics: vector memory limit of 64.0 Gb reached, see mem.maxVSize() --- failed re-building ‘MethReg.Rmd’ SUMMARY: processing the following file failed: ‘MethReg.Rmd’ Error: Vignette re-building failed. Execution halted