############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data recount3 ### ############################################################################## ############################################################################## * checking for file ‘recount3/DESCRIPTION’ ... OK * preparing ‘recount3’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘recount3-quickstart.Rmd’ using rmarkdown Could not fetch https://raw.githubusercontent.com/LieberInstitute/recountWorkflow/master/vignettes/Figure1.png HttpExceptionRequest Request { host = "raw.githubusercontent.com" port = 443 secure = True requestHeaders = [] path = "/LieberInstitute/recountWorkflow/master/vignettes/Figure1.png" queryString = "" method = "GET" proxy = Nothing rawBody = False redirectCount = 10 responseTimeout = ResponseTimeoutDefault requestVersion = HTTP/1.1 proxySecureMode = ProxySecureWithConnect } ConnectionTimeout Error: processing vignette 'recount3-quickstart.Rmd' failed with diagnostics: pandoc document conversion failed with error 61 --- failed re-building ‘recount3-quickstart.Rmd’ SUMMARY: processing the following file failed: ‘recount3-quickstart.Rmd’ Error: Vignette re-building failed. Execution halted