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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data snapcount
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* checking for file ‘snapcount/DESCRIPTION’ ... OK
* preparing ‘snapcount’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘snapcount_vignette.Rmd’ using rmarkdown

Quitting from snapcount_vignette.Rmd:349-361 [jm]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `curl::curl_fetch_memory()`:
! Transferred a partial file [snaptron.cs.jhu.edu]: transfer closed with outstanding read data remaining
---
Backtrace:
     ▆
  1. ├─snapcount::junction_union(gtex, tcga)
  2. │ └─snapcount:::merge_compilations(..., all = TRUE)
  3. │   └─base::lapply(...)
  4. │     └─snapcount (local) FUN(X[[i]], ...)
  5. │       └─snapcount:::get_compilation_metadata(compilation)
  6. │         └─snapcount:::submit_query(uri)
  7. │           └─httr::GET(uri)
  8. │             └─httr:::request_perform(req, hu$handle$handle)
  9. │               ├─httr:::request_fetch(req$output, req$url, handle)
 10. │               └─httr:::request_fetch.write_memory(req$output, req$url, handle)
 11. │                 └─curl::curl_fetch_memory(url, handle = handle)
 12. └─curl:::raise_libcurl_error(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'snapcount_vignette.Rmd' failed with diagnostics:
Transferred a partial file [snaptron.cs.jhu.edu]: transfer closed with outstanding read data remaining
--- failed re-building ‘snapcount_vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘snapcount_vignette.Rmd’

Error: Vignette re-building failed.
Execution halted