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### Running command:
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###   /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data DmelSGI
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* checking for file ‘DmelSGI/DESCRIPTION’ ... OK
* preparing ‘DmelSGI’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘DmelSGI.Rnw’ using knitr

\section{Re-analysis of a genetic interaction screen and experimental design}
\label{secReanalysisHorn}

The choice of the target--query experimental design was based on our
re-analysis of a symmetric genetic interaction matrix of 93 genes
described by~\cite{horn2011mapping}.














Quitting from ./src/sec02_ReanalysisOfHornEtAl.Rnw:9-16 [ReanalysisOfHornEtALLoadLibrary]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'RNAinteractMAPK'
---
Backtrace:
    x
 1. \-base::library("RNAinteractMAPK")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~


Quitting from DmelSGI.Rnw:90-91 [DmelSGIreanalysisOfHornEtAl]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'RNAinteractMAPK'
---
Backtrace:
    x
 1. \-base::library("RNAinteractMAPK")
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'DmelSGI.Rnw' failed with diagnostics:
there is no package called 'RNAinteractMAPK'
--- failed re-building ‘DmelSGI.Rnw’

SUMMARY: processing the following file failed:
  ‘DmelSGI.Rnw’

Error: Vignette re-building failed.
Execution halted