############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.20-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data RforProteomics ### ############################################################################## ############################################################################## * checking for file ‘RforProteomics/DESCRIPTION’ ... OK * preparing ‘RforProteomics’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘RProtVis.Rmd’ using rmarkdown Quitting from lines 172-202 [makemadata] (RProtVis.Rmd) Error: processing vignette 'RProtVis.Rmd' failed with diagnostics: Can't access URL(s): --- failed re-building ‘RProtVis.Rmd’ --- re-building ‘RforProteomics.Rmd’ using rmarkdown starting worker pid=1637668 on localhost:11324 at 11:34:21.369 starting worker pid=1637669 on localhost:11324 at 11:34:21.370 Loading required package: mzID Loading required package: mzID loaded mzID and set parent environment loaded mzID and set parent environment reading 55merge_omssa.mzid... reading 55merge_tandem.mzid... 55merge_omssa.mzid DONE! 55merge_tandem.mzid DONE! Quitting from lines 384-392 [downloadmztab] (RforProteomics.Rmd) Error: processing vignette 'RforProteomics.Rmd' failed with diagnostics: Can't access URL(s): --- failed re-building ‘RforProteomics.Rmd’ SUMMARY: processing the following files failed: ‘RProtVis.Rmd’ ‘RforProteomics.Rmd’ Error: Vignette re-building failed. Execution halted