############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD INSTALL GeneSelectMMD ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.21-bioc/R/site-library’ * installing *source* package ‘GeneSelectMMD’ ... ** this is package ‘GeneSelectMMD’ version ‘2.51.0’ ** using staged installation ** libs using C compiler: ‘gcc (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ using Fortran compiler: ‘GNU Fortran (Ubuntu 13.3.0-6ubuntu2~24.04) 13.3.0’ gcc -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c GeneSelectMMD_init.c -o GeneSelectMMD_init.o gfortran -fpic -g -O2 -c Qfunc.f -o Qfunc.o gfortran -fpic -g -O2 -c blas.f -o blas.o gcc -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c isnan.c -o isnan.o gfortran -fpic -g -O2 -c lbfgsb.f -o lbfgsb.o gfortran -fpic -g -O2 -c lbfgsbDriver.f -o lbfgsbDriver.o gfortran -fpic -g -O2 -c linpack.f -o linpack.o gfortran -fpic -g -O2 -c llkhFun.f -o llkhFun.o gfortran -fpic -g -O2 -c myTtest.f -o myTtest.o gfortran -fpic -g -O2 -c paraEstLoop.f -o paraEstLoop.o gcc -I"/home/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -c pt.c -o pt.o gfortran -fpic -g -O2 -c timer.f -o timer.o gfortran -fpic -g -O2 -c wiFun.f -o wiFun.o gcc -shared -L/home/biocbuild/bbs-3.21-bioc/R/lib -L/usr/local/lib -o GeneSelectMMD.so GeneSelectMMD_init.o Qfunc.o blas.o isnan.o lbfgsb.o lbfgsbDriver.o linpack.o llkhFun.o myTtest.o paraEstLoop.o pt.o timer.o wiFun.o -lgfortran -lm -lquadmath -L/home/biocbuild/bbs-3.21-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.21-bioc/R/site-library/00LOCK-GeneSelectMMD/00new/GeneSelectMMD/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (GeneSelectMMD)