##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.21-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data cBioPortalData
###
##############################################################################
##############################################################################


* checking for file ‘cBioPortalData/DESCRIPTION’ ... OK
* preparing ‘cBioPortalData’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘cBioPortalData.Rmd’ using rmarkdown
--- finished re-building ‘cBioPortalData.Rmd’

--- re-building ‘cBioPortalDataErrors.Rmd’ using rmarkdown
--- finished re-building ‘cBioPortalDataErrors.Rmd’

--- re-building ‘cBioPortalRClient.Rmd’ using rmarkdown
--- finished re-building ‘cBioPortalRClient.Rmd’

--- re-building ‘cgdsrMigration.Rmd’ using rmarkdown

Quitting from lines 365-372 [unnamed-chunk-26] (cgdsrMigration.Rmd)
Error: processing vignette 'cgdsrMigration.Rmd' failed with diagnostics:
Can't select columns that don't exist.
✖ Column `value` doesn't exist.
--- failed re-building ‘cgdsrMigration.Rmd’

SUMMARY: processing the following file failed:
  ‘cgdsrMigration.Rmd’

Error: Vignette re-building failed.
Execution halted