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### Running command:
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###   /home/biocbuild/R/R/bin/R CMD build --keep-empty-dirs --no-resave-data idpr
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* checking for file ‘idpr/DESCRIPTION’ ... OK
* preparing ‘idpr’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘chargeHydropathy-vignette.Rmd’ using rmarkdown
--- finished re-building ‘chargeHydropathy-vignette.Rmd’

--- re-building ‘disorderedMatrices-vignette.Rmd’ using rmarkdown

Quitting from disorderedMatrices-vignette.Rmd:342-351 [unnamed-chunk-13]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'msa'
---
Backtrace:
    ▆
 1. └─base::library(msa)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

Error: processing vignette 'disorderedMatrices-vignette.Rmd' failed with diagnostics:
there is no package called 'msa'
--- failed re-building ‘disorderedMatrices-vignette.Rmd’

--- re-building ‘idpr-vignette.Rmd’ using rmarkdown
--- finished re-building ‘idpr-vignette.Rmd’

--- re-building ‘iupred-vignette.Rmd’ using rmarkdown
--- finished re-building ‘iupred-vignette.Rmd’

--- re-building ‘sequenceMAP-vignette.Rmd’ using rmarkdown
--- finished re-building ‘sequenceMAP-vignette.Rmd’

--- re-building ‘structuralTendency-vignette.Rmd’ using rmarkdown
--- finished re-building ‘structuralTendency-vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘disorderedMatrices-vignette.Rmd’

Error: Vignette re-building failed.
Execution halted