############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data arrayQualityMetrics ### ############################################################################## ############################################################################## * checking for file ‘arrayQualityMetrics/DESCRIPTION’ ... OK * preparing ‘arrayQualityMetrics’: * checking DESCRIPTION meta-information ... OK * installing the package (it is needed to build vignettes) * creating vignettes ... ERROR --- re-building ‘aqm.Rmd’ using rmarkdown Error: processing vignette 'aqm.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘aqm.Rmd’ --- re-building ‘arrayQualityMetrics.Rmd’ using rmarkdown Error: processing vignette 'arrayQualityMetrics.Rmd' failed with diagnostics: subscript out of bounds --- failed re-building ‘arrayQualityMetrics.Rmd’ SUMMARY: processing the following files failed: ‘aqm.Rmd’ ‘arrayQualityMetrics.Rmd’ Error: Vignette re-building failed. Execution halted