############################################################################## ############################################################################## ### ### Running command: ### ### E:\biocbuild\bbs-3.21-bioc\R\bin\R.exe CMD INSTALL DepecheR ### ############################################################################## ############################################################################## * installing to library 'E:/biocbuild/bbs-3.21-bioc/R/library' * installing *source* package 'DepecheR' ... ** this is package 'DepecheR' version '1.23.0' ** using staged installation ** libs using C++ compiler: 'G__~1.EXE (GCC) 14.2.0' using C++11 g++ -std=gnu++11 -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I../inst/include -pthread -I'E:/biocbuild/bbs-3.21-bioc/R/library/Rcpp/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include' -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Clusterer.cpp -o Clusterer.o In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:205, from Clusterer.h:14, from Clusterer.cpp:14: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:174: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:165: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:271: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ Clusterer.h:25:17: required from here 25 | RowMatrixXd centers; | ^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ Clusterer.h:25:17: required from here 25 | RowMatrixXd centers; | ^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, true>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, true>, 2>' 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, true> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, true> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, true>, 0>' 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, true, true>' 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 1, -1, true, Eigen::Dense>' 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 1, -1, true>' 103 | template class Block | ^~~~~ Clusterer.cpp:42:23: required from here 42 | if(!mu.row(i).isZero(0)){ | ~~~~~~^~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ Clusterer.cpp:56:46: required from here 56 | RowMatrixXd distances = RowMatrixXd::Zero(X_rows,non_zero_size); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from 'class Eigen::MapBase, -1, 1, false>, 1>' 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, false, true>' 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, -1, 1, false, Eigen::Dense>' 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, -1, 1, false>' 103 | template class Block | ^~~~~ Clusterer.cpp:58:22: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ~~~~~~~~~~~~~^~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::Matrix, Eigen::Dense>' 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::Matrix >' 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ Clusterer.cpp:58:30: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, true>, -1, 1>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, true>, -1, 1> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, true>, -1, 1> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65: required from 'class Eigen::Replicate, 1, -1, true>, -1, 1>' 61 | template class Replicate | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:58:67: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:58:67: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::Dense>' 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:43:39: required from 'struct Eigen::internal::traits, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 43 | typedef typename MatrixType::Scalar InputScalar; | ^~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/ForwardDeclarations.h:23:29: required from 'struct Eigen::internal::traits, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 23 | template struct traits : traits {}; | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ Clusterer.cpp:58:84: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>' 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr >::type, | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:23:28: required from 'struct Eigen::internal::traits, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> > >' 23 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>, Eigen::Dense>' 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ Clusterer.cpp:58:84: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>, Eigen::Dense>' 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ Clusterer.cpp:58:84: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ Clusterer.cpp:62:20: required from here 62 | Eigen::VectorXd::Index min_index; | ^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, true>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, true>, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, true>, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, true> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, true> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, 1, -1, true>, 0>' 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:223:34: required from 'class Eigen::MapBase, 1, -1, true>, 1>' 223 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, 1, -1, true, true>' 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, 1, -1, true, Eigen::Dense>' 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, 1, -1, true>' 103 | template class Block | ^~~~~ Clusterer.cpp:64:23: required from here 64 | (distances.row(j)).minCoeff(&min_index); | ~~~~~~~~~~~~~^~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, true> >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, true> >, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 1, -1, true> >, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, true> > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, 1, -1, true> > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, 1, -1, true> >' 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ Clusterer.cpp:104:44: required from here 104 | mu_p.row(i)= ((centers.row(i).array()-reg/2)/nums(i)).matrix(); | ~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Array >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:104:51: required from here 104 | mu_p.row(i)= ((centers.row(i).array()-reg/2)/nums(i)).matrix(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:104:51: required from here 104 | mu_p.row(i)= ((centers.row(i).array()-reg/2)/nums(i)).matrix(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' 45 | class Array | ^~~~~ Clusterer.cpp:104:60: required from here 104 | mu_p.row(i)= ((centers.row(i).array()-reg/2)/nums(i)).matrix(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:104:60: required from here 104 | mu_p.row(i)= ((centers.row(i).array()-reg/2)/nums(i)).matrix(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from 'class Eigen::MatrixWrapper, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 140 | class MatrixWrapper : public MatrixBase > | ^~~~~~~~~~~~~ Clusterer.cpp:104:69: required from here 104 | mu_p.row(i)= ((centers.row(i).array()-reg/2)/nums(i)).matrix(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:105:51: required from here 105 | mu_n.row(i)= ((centers.row(i).array()+reg/2)/nums(i)).matrix(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:105:60: required from here 105 | mu_n.row(i)= ((centers.row(i).array()+reg/2)/nums(i)).matrix(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from 'class Eigen::MatrixWrapper, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, 1, -1, true> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 140 | class MatrixWrapper : public MatrixBase > | ^~~~~~~~~~~~~ Clusterer.cpp:105:69: required from here 105 | mu_n.row(i)= ((centers.row(i).array()+reg/2)/nums(i)).matrix(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:107:53: required from here 107 | RowMatrixXd mu_new = mu_n.cwiseMin(mu_p.cwiseMax(0)); | ~~~~~~~~~~~~~^~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, Eigen::Matrix > > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:107:39: required from here 107 | RowMatrixXd mu_new = mu_n.cwiseMin(mu_p.cwiseMax(0)); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 1, -1, true>, -1, 1>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, 1, -1, true>, -1, 1> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, 1, -1, true>, -1, 1> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65: required from 'class Eigen::Replicate, 1, -1, true>, -1, 1>' 61 | template class Replicate | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:159:54: required from here 159 | Eigen::VectorXd dists = ((-X).rowwise()+mu.row(0)).rowwise().squaredNorm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1>, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:159:54: required from here 159 | Eigen::VectorXd dists = ((-X).rowwise()+mu.row(0)).rowwise().squaredNorm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> >, Eigen::Dense>' 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >' 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:43:39: required from 'struct Eigen::internal::traits, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 43 | typedef typename MatrixType::Scalar InputScalar; | ^~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>' 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr >::type, | ^~~~~~~~~~~~~~~~ Clusterer.cpp:159:78: required from here 159 | Eigen::VectorXd dists = ((-X).rowwise()+mu.row(0)).rowwise().squaredNorm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>' 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr >::type, | ^~~~~~~~~~~~~~~~ Clusterer.cpp:159:78: required from here 159 | Eigen::VectorXd dists = ((-X).rowwise()+mu.row(0)).rowwise().squaredNorm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false> >, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, -1, 1, false> > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper, -1, 1, false> >' 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ Clusterer.cpp:193:33: required from here 193 | X.col(i)=(X.col(i).array()/scaling).matrix(); | ~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Array >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Array > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::Array > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Array >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:193:36: required from here 193 | X.col(i)=(X.col(i).array()/scaling).matrix(); | ^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:193:36: required from here 193 | X.col(i)=(X.col(i).array()/scaling).matrix(); | ^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:140:7: required from 'class Eigen::MatrixWrapper, const Eigen::ArrayWrapper, -1, 1, false> >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 140 | class MatrixWrapper : public MatrixBase > | ^~~~~~~~~~~~~ Clusterer.cpp:193:51: required from here 193 | X.col(i)=(X.col(i).array()/scaling).matrix(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::internal::member_sum, 0>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::internal::member_sum, 0> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::internal::member_sum, 0> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:56:7: required from 'class Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>' 56 | class PartialReduxExpr : public internal::dense_xpr_base< PartialReduxExpr >::type, | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:195:37: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:195:37: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:195:37: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ Clusterer.cpp:195:38: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Replicate.h:61:65: required from 'class Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1>' 61 | template class Replicate | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1>, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:195:38: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1>, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:195:38: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true>, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:202:43: required from here 202 | ssq+= (X.row(i)-centers.row(ind(i))).squaredNorm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ Clusterer.cpp:271:56: required from here 271 | Eigen::VectorXd population1 = Eigen::VectorXd::Zero(k); | ~~~~~~~~~~~~~~~~~~~~~^~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase >, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase >, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayWrapper.h:42:7: required from 'class Eigen::ArrayWrapper >' 42 | class ArrayWrapper : public ArrayBase > | ^~~~~~~~~~~~ Clusterer.cpp:281:45: required from here 281 | const double false1 = (population1.array()*(population1.array()-1.0/size)*(size/(size-1))).sum()*(population2.array()*(population2.array()-1.0/size)*(size/(size-1))).sum(); | ~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:281:73: required from here 281 | const double false1 = (population1.array()*(population1.array()-1.0/size)*(size/(size-1))).sum()*(population2.array()*(population2.array()-1.0/size)*(size/(size-1))).sum(); | ^~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Array.h:45:7: required from 'class Eigen::Array' 45 | class Array | ^~~~~ Clusterer.cpp:281:77: required from here 281 | const double false1 = (population1.array()*(population1.array()-1.0/size)*(size/(size-1))).sum()*(population2.array()*(population2.array()-1.0/size)*(size/(size-1))).sum(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:281:77: required from here 281 | const double false1 = (population1.array()*(population1.array()-1.0/size)*(size/(size-1))).sum()*(population2.array()*(population2.array()-1.0/size)*(size/(size-1))).sum(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:281:93: required from here 281 | const double false1 = (population1.array()*(population1.array()-1.0/size)*(size/(size-1))).sum()*(population2.array()*(population2.array()-1.0/size)*(size/(size-1))).sum(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:282:96: required from here 282 | const double false2 = (population1.array()*(1-(population1.array()-1.0/size)*(size/(size-1)))).sum()*(population2.array()*(1-(population2.array()-1.0/size)*(size/(size-1)))).sum(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:282:96: required from here 282 | const double false2 = (population1.array()*(1-(population1.array()-1.0/size)*(size/(size-1)))).sum()*(population2.array()*(1-(population2.array()-1.0/size)*(size/(size-1)))).sum(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/ArrayBase.h:39:34: required from 'class Eigen::ArrayBase, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >' 39 | template class ArrayBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:282:97: required from here 282 | const double false2 = (population1.array()*(1-(population1.array()-1.0/size)*(size/(size-1)))).sum()*(population2.array()*(1-(population2.array()-1.0/size)*(size/(size-1)))).sum(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, const Eigen::Matrix >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:38:28: required from 'struct Eigen::internal::traits, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' 38 | >::type Scalar; | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:387:30: required from here 387 | ret.distances= distances/iterations; | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:148:7: required from 'class Eigen::CwiseBinaryOpImpl, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix >, Eigen::Dense>' 148 | class CwiseBinaryOpImpl | ^~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseBinaryOp.h:77:7: required from 'class Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >' 77 | class CwiseBinaryOp : | ^~~~~~~~~~~~~ Clusterer.cpp:387:30: required from here 387 | ret.distances= distances/iterations; | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:277: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, true> >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:372:102: required from 'struct Eigen::internal::plain_object_eval, 1, -1, true>, Eigen::Dense>' 372 | typedef typename plain_matrix_type_dense::XprKind, evaluator::Flags>::type type; | ^~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:530:51: required from 'bool Eigen::DenseBase::isZero(const RealScalar&) const [with Derived = Eigen::Block, 1, -1, true>; RealScalar = double]' 530 | typename internal::nested_eval::type self(derived()); | ^~~~ Clusterer.cpp:42:33: required from here 42 | if(!mu.row(i).isZero(0)){ | ~~~~~~~~~~~~~~~~^~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:94:7: required from 'class Eigen::CwiseUnaryOpImpl, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >, Eigen::Dense>' 94 | class CwiseUnaryOpImpl | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseUnaryOp.h:55:7: required from 'class Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >' 55 | class CwiseUnaryOp : public CwiseUnaryOpImpl::StorageKind>, internal::no_assignment_operator | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:40: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~^~ Clusterer.cpp:202:57: required from here 202 | ssq+= (X.row(i)-centers.row(ind(i))).squaredNorm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, 1, -1, true> >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:79:51: required from 'class Eigen::internal::visitor_evaluator, 1, -1, true> >' 79 | CoeffReadCost = internal::evaluator::CoeffReadCost | ^~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:123:17: required from 'void Eigen::DenseBase::visit(Visitor&) const [with Visitor = Eigen::internal::min_coeff_visitor, 1, -1, true>, 0>; Derived = Eigen::Block, 1, -1, true>]' 123 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Visitor.h:323:14: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::minCoeff(IndexType*) const [with int NaNPropagation = 0; IndexType = long long int; Derived = Eigen::Block, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]' 323 | this->visit(minVisitor); | ~~~~~~~~~~~^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:496:37: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::minCoeff(IndexType*) const [with IndexType = long long int; Derived = Eigen::Block, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]' 496 | return minCoeff(index); | ~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ Clusterer.cpp:64:36: required from here 64 | (distances.row(j)).minCoeff(&min_index); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Eigen::Index = long long int]': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >; Scalar = double]' 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; typename Eigen::internal::traits::Scalar = double]' 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > > >, const Eigen::CwiseNullaryOp, const Eigen::Array > >; typename Eigen::internal::traits::Scalar = double]' 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clusterer.cpp:281:99: required from here 281 | const double false1 = (population1.array()*(population1.array()-1.0/size)*(size/(size-1))).sum()*(population2.array()*(population2.array()-1.0/size)*(size/(size-1))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; Eigen::Index = long long int]': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > > >; Scalar = double]' 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; typename Eigen::internal::traits::Scalar = double]' 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseBinaryOp, const Eigen::CwiseNullaryOp, const Eigen::Array >, const Eigen::CwiseBinaryOp, const Eigen::CwiseBinaryOp, const Eigen::ArrayWrapper >, const Eigen::CwiseNullaryOp, const Eigen::Array > >, const Eigen::CwiseNullaryOp, const Eigen::Array > > > >; typename Eigen::internal::traits::Scalar = double]' 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clusterer.cpp:282:103: required from here 282 | const double false2 = (population1.array()*(1-(population1.array()-1.0/size)*(size/(size-1)))).sum()*(population2.array()*(1-(population2.array()-1.0/size)*(size/(size-1)))).sum(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'Eigen::Index Eigen::internal::first_default_aligned(const Eigen::DenseBase&) [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >; Eigen::Index = long long int]': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:243:63: required from 'static Eigen::internal::redux_impl::Scalar Eigen::internal::redux_impl::run(const Evaluator&, const Func&, const XprType&) [with XprType = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >; Func = Eigen::internal::scalar_sum_op; Evaluator = Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > > >; Scalar = double]' 243 | const Index alignedStart = internal::first_default_aligned(xpr); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:418:56: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >; typename Eigen::internal::traits::Scalar = double]' 418 | return internal::redux_impl::run(thisEval, func, derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> > >; typename Eigen::internal::traits::Scalar = double]' 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Dot.h:98:46: required from 'typename Eigen::NumTraits::Scalar>::Real Eigen::MatrixBase::squaredNorm() const [with Derived = Eigen::CwiseBinaryOp, const Eigen::Block, 1, -1, true>, const Eigen::Block, 1, -1, true> >; typename Eigen::NumTraits::Scalar>::Real = double; typename Eigen::internal::traits::Scalar = double]' 98 | return numext::real((*this).cwiseAbs2().sum()); | ~~~~~~~~~~~~~~~~~~~~~~~^~ Clusterer.cpp:202:57: required from here 202 | ssq+= (X.row(i)-centers.row(ind(i))).squaredNorm(); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:654:74: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 654 | return internal::first_aligned::alignment),Derived>(m); | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:780:20: required from 'void Eigen::internal::call_dense_assignment_loop(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >; Functor = assign_op]' 780 | DstEvaluatorType dstEvaluator(dst); | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >; Functor = Eigen::internal::assign_op; Weak = void]' 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >]' 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from 'Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >; Derived = Eigen::Block, -1, 1, false>]' 66 | internal::call_assignment(derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clusterer.cpp:58:85: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true, false>' 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true, Eigen::Dense>' 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>' 103 | template class Block | ^~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:72: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; Functor = Eigen::internal::assign_op; Weak = void]' 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1>; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; Derived = Eigen::Matrix]' 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; Derived = Eigen::Matrix]' 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' 423 | : Base(other.derived()) | ^ Clusterer.cpp:159:79: required from here 159 | Eigen::VectorXd dists = ((-X).rowwise()+mu.row(0)).rowwise().squaredNorm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:172:103: required from 'class Eigen::internal::BlockImpl_dense, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true, false>' 172 | template class BlockImpl_dense | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: required from 'class Eigen::BlockImpl, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true, Eigen::Dense>' 154 | class BlockImpl | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:103:81: required from 'class Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>' 103 | template class Block | ^~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:72: [ skipping 5 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >; Functor = Eigen::internal::assign_op; Weak = void]' 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >]' 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from 'Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >; Derived = Eigen::Block, -1, 1, false>]' 66 | internal::call_assignment(derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clusterer.cpp:58:85: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from 'class Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >' 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]' 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]' 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>; ResultType = double; Scalar = double]' 97 | { return mat.MEMBER(); } \ | ~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >; MemberOp = Eigen::internal::member_sum; int Direction = 1; Scalar = double; Eigen::Index = long long int]' 183 | return m_functor(m_arg.template subVector(index)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:660:61: [ skipping 3 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Matrix; SrcXprType = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; Functor = Eigen::internal::assign_op; Weak = void]' 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1>; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:797:41: required from 'Derived& Eigen::PlainObjectBase::_set_noalias(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; Derived = Eigen::Matrix]' 797 | internal::call_assignment_no_alias(this->derived(), other.derived(), internal::assign_op()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:594:19: required from 'Eigen::PlainObjectBase::PlainObjectBase(const Eigen::DenseBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; Derived = Eigen::Matrix]' 594 | _set_noalias(other); | ~~~~~~~~~~~~^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:423:29: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::Matrix(const Eigen::EigenBase&) [with OtherDerived = Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1>; _Scalar = double; int _Rows = -1; int _Cols = 1; int _Options = 0; int _MaxRows = -1; int _MaxCols = 1]' 423 | : Base(other.derived()) | ^ Clusterer.cpp:159:79: required from here 159 | Eigen::VectorXd dists = ((-X).rowwise()+mu.row(0)).rowwise().squaredNorm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from 'class Eigen::internal::redux_evaluator, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true> >' 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]' 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>; typename Eigen::internal::traits::Scalar = double]' 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, 1, -1, true>; ResultType = double; Scalar = double]' 97 | { return mat.MEMBER(); } \ | ~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = const Eigen::CwiseUnaryOp, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >; MemberOp = Eigen::internal::member_sum; int Direction = 1; Scalar = double; Eigen::Index = long long int]' 183 | return m_functor(m_arg.template subVector(index)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:589:40: [ skipping 4 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:954:31: required from 'static void Eigen::internal::Assignment::run(DstXprType&, const SrcXprType&, const Functor&) [with DstXprType = Eigen::Block, -1, 1, false>; SrcXprType = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >; Functor = Eigen::internal::assign_op; Weak = void]' 954 | call_dense_assignment_loop(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Block, -1, 1, false>; Src = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, member_sum, 1> >]' 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Assign.h:66:28: required from 'Derived& Eigen::MatrixBase::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseUnaryOp, const Eigen::PartialReduxExpr, const Eigen::CwiseBinaryOp, const Eigen::CwiseUnaryOp, const Eigen::Matrix >, const Eigen::Replicate, 1, -1, true>, -1, 1> > >, Eigen::internal::member_sum, 1> >; Derived = Eigen::Block, -1, 1, false>]' 66 | internal::call_assignment(derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~ Clusterer.cpp:58:85: required from here 58 | distances.col(i)= ((-X).rowwise()+mu.row(active_indices[i])).rowwise().norm(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 2, true>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase, -1, 2, true>, 2>' 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 2, true> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 2, true> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 2, true>, 0>' 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 2, true, true>' 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 20 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >]' 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Derived = Eigen::Matrix]' 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ Clusterer.cpp:195:38: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 2, true> >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from 'class Eigen::internal::redux_evaluator, -1, 2, true> >' 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:217:20: required from 'PacketType Eigen::internal::evaluator >::packet(Eigen::Index) const [with int LoadMode = 0; PacketType = __vector(2) double; ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 0; Eigen::Index = long long int]' 217 | PanelEvaluator panel_eval(panel); | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:790:80: required from 'PacketType Eigen::internal::binary_evaluator, Eigen::internal::IndexBased, Eigen::internal::IndexBased>::packet(Eigen::Index) const [with int LoadMode = 0; PacketType = __vector(2) double; BinaryOp = Eigen::internal::scalar_quotient_op; Lhs = const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; Rhs = const Eigen::CwiseNullaryOp, const Eigen::Matrix >; typename Eigen::internal::traits::Lhs>::Scalar = double; typename Eigen::CwiseBinaryOp::Lhs = Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>; typename Eigen::internal::traits::Rhs>::Scalar = double; typename Eigen::CwiseBinaryOp::Rhs = Eigen::CwiseNullaryOp, const Eigen::Matrix >; Eigen::Index = long long int]' 790 | return m_d.func().packetOp(m_d.lhsImpl.template packet(index), | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:681:114: required from 'void Eigen::internal::generic_dense_assignment_kernel::assignPacket(Eigen::Index) [with int StoreMode = 16; int LoadMode = 0; PacketType = __vector(2) double; DstEvaluatorTypeT = Eigen::internal::evaluator >; SrcEvaluatorTypeT = Eigen::internal::evaluator, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >; Functor = Eigen::internal::assign_op; int Version = 0; Eigen::Index = long long int]' 681 | m_functor.template assignPacket(&m_dst.coeffRef(index), m_src.template packet(index)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:437:75: required from 'static void Eigen::internal::dense_assignment_loop::run(Kernel&) [with Kernel = Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > > >, Eigen::internal::assign_op, 0>]' 437 | kernel.template assignPacket(index); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:785:37: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >]' 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Derived = Eigen::Matrix]' 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ Clusterer.cpp:195:38: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, -1, 1, false>, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:481:7: required from 'class Eigen::DenseCoeffsBase, -1, 1, false>, 2>' 481 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, -1, 1, false> >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, -1, 1, false> >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MapBase.h:37:34: required from 'class Eigen::MapBase, -1, 1, false>, 0>' 37 | template class MapBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:329:7: required from 'class Eigen::internal::BlockImpl_dense, -1, 1, false, true>' 329 | class BlockImpl_dense | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Block.h:154:7: [ skipping 21 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >]' 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Derived = Eigen::Matrix]' 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ Clusterer.cpp:195:38: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h: In instantiation of 'struct Eigen::internal::evaluator, -1, 1, false> >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:357:7: required from 'class Eigen::internal::redux_evaluator, -1, 1, false> >' 357 | class redux_evaluator : public internal::evaluator<_XprType> | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:414:17: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::redux(const Func&) const [with BinaryOp = Eigen::internal::scalar_sum_op; Derived = Eigen::Block, -1, 1, false>; typename Eigen::internal::traits::Scalar = double]' 414 | ThisEvaluator thisEval(derived()); | ^~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Redux.h:463:25: required from 'typename Eigen::internal::traits::Scalar Eigen::DenseBase::sum() const [with Derived = Eigen::Block, -1, 1, false>; typename Eigen::internal::traits::Scalar = double]' 463 | return derived().redux(Eigen::internal::scalar_sum_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/VectorwiseOp.h:114:1: required from 'ResultType Eigen::internal::member_sum::operator()(const XprType&) const [with XprType = Eigen::Block, -1, 1, false>; ResultType = double; Scalar = double]' 97 | { return mat.MEMBER(); } \ | ~~~~~~~~~~^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:183:21: required from 'const Eigen::internal::evaluator >::Scalar Eigen::internal::evaluator >::coeff(Eigen::Index) const [with ArgType = Eigen::Matrix; MemberOp = Eigen::internal::member_sum; int Direction = 0; Scalar = double; Eigen::Index = long long int]' 183 | return m_functor(m_arg.template subVector(index)); | ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PartialReduxEvaluator.h:214:47: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:890:49: required from 'void Eigen::internal::call_assignment_no_alias(Dst&, const Src&, const Func&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op]' 890 | Assignment::run(actualDst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:858:27: required from 'void Eigen::internal::call_assignment(Dst&, const Src&, const Func&, typename enable_if<(! evaluator_assume_aliasing::value), void*>::type) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Func = assign_op; typename enable_if<(! evaluator_assume_aliasing::value), void*>::type = void*; typename evaluator_traits::Shape = Eigen::DenseShape]' 858 | call_assignment_no_alias(dst, src, func); | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/AssignEvaluator.h:836:18: required from 'void Eigen::internal::call_assignment(Dst&, const Src&) [with Dst = Eigen::Matrix; Src = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >]' 836 | call_assignment(dst, src, internal::assign_op()); | ~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:779:32: required from 'Derived& Eigen::PlainObjectBase::_set(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; Derived = Eigen::Matrix]' 779 | internal::call_assignment(this->derived(), other.derived()); | ~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:225:24: required from 'Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>& Eigen::Matrix<_Scalar, _Rows, _Cols, _Options, _MaxRows, _MaxCols>::operator=(const Eigen::DenseBase&) [with OtherDerived = Eigen::CwiseBinaryOp, const Eigen::Matrix, const Eigen::Replicate, const Eigen::PartialReduxExpr, Eigen::internal::member_sum, 0>, const Eigen::CwiseNullaryOp, const Eigen::Matrix > >, -1, 1> >; _Scalar = double; int _Rows = -1; int _Cols = -1; int _Options = 1; int _MaxRows = -1; int _MaxCols = -1]' 225 | return Base::_set(other); | ~~~~~~~~~~^~~~~~~ Clusterer.cpp:195:38: required from here 195 | X = X.rowwise()-X.colwise().mean(); | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CoreEvaluators.h:1071:54: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 1071 | PacketAlignment = unpacket_traits::alignment, | ^~~~~~~~~ g++ -std=gnu++11 -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I../inst/include -pthread -I'E:/biocbuild/bbs-3.21-bioc/R/library/Rcpp/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include' -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c InterfaceUtils.cpp -o InterfaceUtils.o In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:205, from Clusterer.h:14, from InterfaceUtils.cpp:9: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:174: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:165: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:271: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ Clusterer.h:25:17: required from here 25 | RowMatrixXd centers; | ^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ Clusterer.h:25:17: required from here 25 | RowMatrixXd centers; | ^~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ InterfaceUtils.cpp:26:39: required from here 26 | RowMatrixXd data = RowMatrixXd::Zero(rows,cols); | ~~~~~~~~~~~~~~~~~^~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ InterfaceUtils.cpp:35:55: required from here 35 | Eigen::VectorXd numericVector_to_eigen(NumericVector X){ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, Eigen::Matrix >, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase, Eigen::Matrix > >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase, Eigen::Matrix > >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/CwiseNullaryOp.h:60:7: required from 'class Eigen::CwiseNullaryOp, Eigen::Matrix >' 60 | class CwiseNullaryOp : public internal::dense_xpr_base< CwiseNullaryOp >::type, internal::no_assignment_operator | ^~~~~~~~~~~~~~ InterfaceUtils.cpp:37:47: required from here 37 | Eigen::VectorXd data = Eigen::VectorXd::Zero(rows); | ~~~~~~~~~~~~~~~~~~~~~^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -std=gnu++11 -I"E:/biocbuild/bbs-3.21-bioc/R/include" -DNDEBUG -I../inst/include -pthread -I'E:/biocbuild/bbs-3.21-bioc/R/library/Rcpp/include' -I'E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include' -I"C:/rtools45/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:205, from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Dense:1, from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/RcppEigenForward.h:28, from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/RcppEigen.h:25, from RcppExports.cpp:4: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:46:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 46 | typedef eigen_packet_wrapper<__m128i, 0> Packet4i; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:47:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 47 | typedef eigen_packet_wrapper<__m128i, 1> Packet16b; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:49:39: warning: ignoring attributes on template argument '__m128' [-Wignored-attributes] 49 | template<> struct is_arithmetic<__m128> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:50:40: warning: ignoring attributes on template argument '__m128i' [-Wignored-attributes] 50 | template<> struct is_arithmetic<__m128i> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:51:40: warning: ignoring attributes on template argument '__m128d' [-Wignored-attributes] 51 | template<> struct is_arithmetic<__m128d> { enum { value = true }; }; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:222:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 222 | template<> struct unpacket_traits { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:228:43: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 228 | template<> struct unpacket_traits { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1124:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 1124 | ptranspose(PacketBlock& kernel) { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/PacketMath.h:1129:34: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 1129 | ptranspose(PacketBlock& kernel) { | ^ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:174: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet4f' {aka '__m128'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:173:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 173 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet2cf,Packet4f) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:16:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 16 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/Default/ConjHelper.h:29:60: warning: ignoring attributes on template argument 'Eigen::internal::Packet2d' {aka '__m128d'} [-Wignored-attributes] 29 | struct conj_helper { \ | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/arch/SSE/Complex.h:298:1: note: in expansion of macro 'EIGEN_MAKE_CONJ_HELPER_CPLX_REAL' 298 | EIGEN_MAKE_CONJ_HELPER_CPLX_REAL(Packet1cd,Packet2d) | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:165: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:24:46: required from here 24 | ResAlignment = traits >::Alignment | ^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(4) float>::half' {aka '__m128'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Core:271: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:27:3: required from here 27 | { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h: In instantiation of 'struct Eigen::internal::find_best_packet': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:22:57: required from 'struct Eigen::internal::traits >' 22 | typedef typename find_best_packet<_Scalar,size>::type PacketScalar; | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:266:49: required from 'struct Eigen::internal::traits >' 266 | Alignment = internal::traits::Alignment, | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:98:47: required from here 98 | ResAlignment = traits >::Alignment | ^~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:44: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 190 | bool Stop = Size==Dynamic || (Size%unpacket_traits::size)==0 || is_same::half>::value> | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:190:83: warning: ignoring attributes on template argument 'Eigen::internal::unpacket_traits<__vector(2) double>::half' {aka '__m128d'} [-Wignored-attributes] E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/util/XprHelper.h:208:88: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 208 | typedef typename find_best_packet_helper::type>::type type; | ^~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h: In instantiation of 'class Eigen::DenseCoeffsBase, 0>': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:302:7: required from 'class Eigen::DenseCoeffsBase, 1>' 302 | class DenseCoeffsBase : public DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:555:7: required from 'class Eigen::DenseCoeffsBase, 3>' 555 | class DenseCoeffsBase | ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseBase.h:41:34: required from 'class Eigen::DenseBase >' 41 | template class DenseBase | ^~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/MatrixBase.h:48:34: required from 'class Eigen::MatrixBase >' 48 | template class MatrixBase | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/PlainObjectBase.h:98:7: required from 'class Eigen::PlainObjectBase >' 98 | class PlainObjectBase : public internal::dense_xpr_base::type | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/Matrix.h:178:7: required from 'class Eigen::Matrix' 178 | class Matrix | ^~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:46:50: required from 'class Eigen::QuaternionBase >' 46 | typedef typename Coefficients::CoeffReturnType CoeffReturnType; | ^~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/Quaternion.h:273:7: required from 'class Eigen::Quaternion' 273 | class Quaternion : public QuaternionBase > | ^~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Geometry/arch/Geometry_SIMD.h:102:3: required from here 102 | { | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/Core/DenseCoeffsBase.h:56:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 56 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ In file included from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/SparseCore:37, from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/Sparse:26, from E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/RcppEigenForward.h:29: E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h: In instantiation of 'class Eigen::SparseMatrixBase >': E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseCompressedBase.h:36:7: required from 'class Eigen::SparseCompressedBase >' 36 | class SparseCompressedBase | ^~~~~~~~~~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrix.h:96:7: required from 'class Eigen::SparseMatrix' 96 | class SparseMatrix | ^~~~~~~~~~~~ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/ConstrainedConjGrad.h:61:25: required from here 61 | typedef Triplet T; | ^ E:/biocbuild/bbs-3.21-bioc/R/library/RcppEigen/include/Eigen/src/SparseCore/SparseMatrixBase.h:47:30: warning: ignoring attributes on template argument 'Eigen::internal::packet_traits::type' {aka '__m128d'} [-Wignored-attributes] 47 | >::type PacketReturnType; | ^~~~~~~~~~~~~~~~ g++ -shared -s -static-libgcc -o DepecheR.dll tmp.def Clusterer.o InterfaceUtils.o RcppExports.o -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools45/x86_64-w64-mingw32.static.posix/lib -LE:/biocbuild/bbs-3.21-bioc/R/bin/x64 -lR if test -e "/usr/bin/strip" && test -e "/bin/uname" && [[ `uname` == "Linux" ]] ; then /usr/bin/strip --strip-debug DepecheR.dll; fi rm *.o installing to E:/biocbuild/bbs-3.21-bioc/R/library/00LOCK-DepecheR/00new/DepecheR/libs/x64 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DepecheR)