| Back to --- experimental! --- GPU-enabled build/check report for BioC 3.24 Report updated every 6 hours |
This page was generated on 2026-05-07 14:30 -0400 (Thu, 07 May 2026).
| Hostname: | amarone |
| OS: | Linux (Ubuntu 24.04.4 LTS) |
| Arch: | x86_64 |
| Platform: | x86_64-linux-gnu |
| R version: | 4.6.0 (2026-04-24) -- "Because it was There" |
| R environment variables: | Renviron.bioc |
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CC | gcc -std=gnu2x |
| CFLAGS | -g -O2 -Wall -Werror=format-security |
| CPICFLAGS | -fpic |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('gcc -std=gnu2x --version' output):
gcc (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CXX | g++ -std=gnu++20 |
| CXXFLAGS | -g -O2 -Wall -Werror=format-security |
| CXXPICFLAGS | -fpic |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('g++ -std=gnu++20 --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CXX17 | g++ |
| CXX17FLAGS | -g -O2 -Wall -Werror=format-security |
| CXX17PICFLAGS | -fpic |
| CXX17STD | -std=gnu++17 |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
| R variable (VAR) | Value ('R CMD config <VAR>' output) |
| CXX20 | g++ |
| CXX20FLAGS | -g -O2 -Wall -Werror=format-security |
| CXX20PICFLAGS | -fpic |
| CXX20STD | -std=gnu++20 |
| Please refer to 'R CMD config -h' for the meaning of these variables | |
Compiler version ('g++ --version' output):
g++ (Ubuntu 13.3.0-6ubuntu2~24.04.1) 13.3.0 Copyright (C) 2023 Free Software Foundation, Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
java version ('java --version' output):
openjdk 21.0.10 2026-01-20 OpenJDK Runtime Environment (build 21.0.10+7-Ubuntu-124.04) OpenJDK 64-Bit Server VM (build 21.0.10+7-Ubuntu-124.04, mixed mode, sharing)
pandoc version ('pandoc --version' output):
pandoc 3.1.3 Features: -server +lua Scripting engine: Lua 5.4 User data directory: /home/biocbuild/.local/share/pandoc Copyright (C) 2006-2023 John MacFarlane. Web: https://pandoc.org This is free software; see the source for copying conditions. There is no warranty, not even for merchantability or fitness for a particular purpose.
nvcc version ('nvcc --version' output):
nvcc: NVIDIA (R) Cuda compiler driver Copyright (c) 2005-2026 NVIDIA Corporation Built on Thu_Mar_19_11:12:51_PM_PDT_2026 Cuda compilation tools, release 13.2, V13.2.78 Build cuda_13.2.r13.2/compiler.37668154_0
nvidia-smi version ('nvidia-smi --version' output):
Thu May 7 18:01:49 2026 +-----------------------------------------------------------------------------------------+ | NVIDIA-SMI 595.58.03 Driver Version: 595.58.03 CUDA Version: 13.2 | +-----------------------------------------+------------------------+----------------------+ | GPU Name Persistence-M | Bus-Id Disp.A | Volatile Uncorr. ECC | | Fan Temp Perf Pwr:Usage/Cap | Memory-Usage | GPU-Util Compute M. | | | | MIG M. | |=========================================+========================+======================| | 0 NVIDIA L40S On | 00000000:05:00.0 Off | 0 | | N/A 67C P0 289W / 350W | 31237MiB / 46068MiB | 100% Default | | | | N/A | +-----------------------------------------+------------------------+----------------------+ +-----------------------------------------------------------------------------------------+ | Processes: | | GPU GI CI PID Type Process name GPU Memory | | ID ID Usage | |=========================================================================================| | No running processes found | +-----------------------------------------------------------------------------------------+
More information might be added in the future...