############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data MsBackendMetaboLights ### ############################################################################## ############################################################################## * checking for file ‘MsBackendMetaboLights/DESCRIPTION’ ... OK * preparing ‘MsBackendMetaboLights’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘MsBackendMetaboLights.Rmd’ using rmarkdown Quitting from lines 201-203 [unnamed-chunk-12] (MsBackendMetaboLights.Rmd) Error: processing vignette 'MsBackendMetaboLights.Rmd' failed with diagnostics: Failed to connect to MetaboLights. No internet connection? Does the data set "MTBLS39" exist? - cannot open the connection --- failed re-building ‘MsBackendMetaboLights.Rmd’ SUMMARY: processing the following file failed: ‘MsBackendMetaboLights.Rmd’ Error: Vignette re-building failed. Execution halted