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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:enrichViewNet.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings enrichViewNet_1.4.0.tar.gz
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* using log directory ‘/Users/biocbuild/bbs-3.20-bioc/meat/enrichViewNet.Rcheck’
* using R version 4.4.2 (2024-10-31)
* using platform: aarch64-apple-darwin20
* R was compiled by
    Apple clang version 14.0.0 (clang-1400.0.29.202)
    GNU Fortran (GCC) 12.2.0
* running under: macOS Ventura 13.7.1
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘enrichViewNet/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘enrichViewNet’ version ‘1.4.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘enrichViewNet’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... ERROR
Running examples in ‘enrichViewNet-Ex.R’ failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: demoGOST
> ### Title: The result of a functional enrichment analysis done with
> ###   'gprofiler2'
> ###   (<https://cran.r-project.org/web/packages/gprofiler2/vignettes/gprofiler2.html>).
> ### Aliases: demoGOST
> ### Keywords: datasets
> 
> ### ** Examples
> 
> 
> ## Loading dataset containing result from an enrichment analysis done with
> ## gprofiler2
> data(demoGOST)
> 
> ## Create network for WikiPathways results 
> ## in Cytoscape (if the application is open)
> ## Otherwise, create a CX file in the temporary directory
> ## The file can be opened in Cytoscape
> createNetwork(gostObject=demoGOST, source="WP", title="Wikipathways",
+     fileName=file.path(tempdir(), "Wikipathways_Demo.cx"))
Error in gprofiler_request(url, body) : 
  There's an issue with your request to g:Profiler.
Error code: 301.
Please double check your input. If this doesn't help, then check your internet connection or contact us with a reproducible example on biit.support@ut.ee
Calls: createNetwork ... extractInformationWhenNoIntersection -> gconvert -> gprofiler_request
Execution halted
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘testthat.R’
 ERROR
Running the tests in ‘tests/testthat.R’ failed.
Last 13 lines of output:
   3.     └─gprofiler2:::gprofiler_request(url, body)
  ── Error ('test-methodsInternal.R:414:5'): createCXJSONForCytoscape() must return expected text ──
  Error in `gprofiler_request(url, body)`: There's an issue with your request to g:Profiler.
  Error code: 301.
  Please double check your input. If this doesn't help, then check your internet connection or contact us with a reproducible example on biit.support@ut.ee
  Backtrace:
      ▆
   1. └─enrichViewNet:::extractNodesAndEdgesInformation(...) at test-methodsInternal.R:414:5
   2.   └─enrichViewNet:::extractInformationWhenNoIntersection(...)
   3.     └─gprofiler2::gconvert(query = c(listTerm$term_id), organism = gostObject$meta$query_metadata$organism)
   4.       └─gprofiler2:::gprofiler_request(url, body)
  
  [ FAIL 3 | WARN 0 | SKIP 0 | PASS 97 ]
  Error: Test failures
  Execution halted
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE

Status: 2 ERRORs
See
  ‘/Users/biocbuild/bbs-3.20-bioc/meat/enrichViewNet.Rcheck/00check.log’
for details.