############################################################################## ############################################################################## ### ### Running command: ### ### chmod a+r TCGAWorkflow -R && F:\biocbuild\bbs-3.20-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data TCGAWorkflow ### ############################################################################## ############################################################################## * checking for file 'TCGAWorkflow/DESCRIPTION' ... OK * preparing 'TCGAWorkflow': * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building 'TCGAWorkflow.Rmd' using rmarkdown Quitting from lines 509-527 [unnamed-chunk-8] (TCGAWorkflow.Rmd) Error: processing vignette 'TCGAWorkflow.Rmd' failed with diagnostics: Supplied 617 items to be assigned to 1175 items of column 'submitter_id'. If you wish to 'recycle' the RHS please use rep() to make this intent clear to readers of your code. --- failed re-building 'TCGAWorkflow.Rmd' SUMMARY: processing the following file failed: 'TCGAWorkflow.Rmd' Error: Vignette re-building failed. Execution halted