Dashboard
This page was built 2025-02-16T18:05:07Z.
Quick Links
Build System Status
Legend: TIMEOUT ERROR WARNINGS OK
Release
Devel
Recent Commits
Last 10 commit to Bioconductor release:
| IntEREst | 2025-02-14 00:17:59 +0200 |
| BioNAR | 2025-02-14 11:12:45 +0900 |
| singleCellTK | 2025-02-13 11:47:56 -0500 |
| celda | 2025-02-13 07:23:50 -0500 |
| HuBMAPR | 2025-02-12 18:11:32 -0500 |
| pgxRpi | 2025-02-12 15:26:39 +0100 |
| EpiCompare | 2025-02-12 12:25:53 +0000 |
| CatsCradle | 2025-02-11 14:33:26 +0000 |
| gDR | 2025-02-11 13:01:17 +0100 |
| gDRcore | 2025-02-11 12:59:33 +0100 |
Last 10 commit to Bioconductor devel:
| SingleMoleculeFootprinting | 2025-02-16 17:54:43 +0100 |
| SingleR | 2025-02-15 23:32:32 -0800 |
| twilight | 2025-02-15 21:39:47 -0500 |
| BiocParallel | 2025-02-15 16:57:50 -0500 |
| EpiCompare | 2025-02-14 18:06:50 +0000 |
| MetaboDynamics | 2025-02-14 18:14:27 +0100 |
| SynExtend | 2025-02-14 11:28:28 -0500 |
| gDRutils | 2025-02-14 15:51:50 +0100 |
| SigCheck | 2025-02-14 12:25:31 +0000 |
| EWCE | 2025-02-14 10:35:56 +0000 |
Newest Packages
Software Packages
| chevreulShiny | Tools for managing SingleCellExperiment objects as projects |
| chevreulProcess | Tools for managing SingleCellExperiment objects as projects |
| chevreulPlot | Plots used in the chevreulPlot package |
| MetaboDynamics | Bayesian analysis of longitudinal metabolomics data |
| biocmake | CMake for Bioconductor |
| PICB | piRNA Cluster Builder |
| SpatialExperimentIO | Read in Xenium, CosMx, MERSCOPE or STARmapPLUS data as SpatialExperiment object |
| scQTLtools | An R package for single-cell eQTL analysis and visualization |
| spatialFDA | A Tool for Spatial Multi-sample Comparisons |
| smoppix | Analyze Single Molecule Spatial Omics Data Using the Probabilistic Index |
Experiment Data Packages
| humanHippocampus2024 | Access to SRT and snRNA-seq data from spatial_HPC project |
| eoPredData | ExperimentHub package containing model data for predicting preeclampsia status for based on plcaental DNA methylation profile |
| ProteinGymR | Programmatic access to ProteinGym datasets in R/Bioconductor |
| CoSIAdata | VST normalized RNA-Sequencing data with annotations for multiple species samples from Bgee |
| LegATo | LegATo: Longitudinal mEtaGenomic Analysis Toolkit |
| EpipwR.data | EpipwR.data: Reference data for EpipwR |
| bugphyzz | A harmonized data resource and software for enrichment analysis of microbial physiologies |
| homosapienDEE2CellScore | Example Data Package for CellScore |
| JohnsonKinaseData | Kinase PWMs based on data published by Johnson et al. 2023 and Yaron-Barir et al. 2024 |
| CytoMethIC | DNA methylation-based machine learning models |
Single Package Builder
All Current Submissions
Recent Submissions
Recent Builds
| limpa | 2025-02-15T09:30:20 |
| MultiModalGraphics | 2025-02-15T01:41:20 |
| dandelionR | 2025-02-14T21:15:39 |
| DeconvoBuddies | 2025-02-14T16:05:11 |
| DeconvoBuddies | 2025-02-14T15:52:24 |
| DeconvoBuddies | 2025-02-14T15:39:41 |
| DeconvoBuddies | 2025-02-14T15:34:16 |
| DeconvoBuddies | 2025-02-14T15:26:39 |
| TENET.ExperimentHub | 2025-02-14T05:11:35 |
| TENET | 2025-02-14T04:51:54 |
| vmrseq | 2025-02-13T04:05:48 |
| crumblr | 2025-02-12T19:54:46 |
| ELViS | 2025-02-12T18:12:01 |
| ELViS | 2025-02-12T17:40:32 |
| HVP | 2025-02-12T04:21:09 |
| TENET | 2025-02-12T03:47:35 |
| TENET.ExperimentHub | 2025-02-12T03:47:11 |
| ELViS | 2025-02-12T00:04:23 |
| ELViS | 2025-02-11T23:45:42 |
| ELViS | 2025-02-11T22:26:28 |
Support
Answer: SingleR with multiple single ...
2025-02-16T07:40:26Z
2025-02-16T07:40:26Z
SingleR with multiple single cell ref...
2025-02-15T23:59:32Z
2025-02-15T23:59:32Z
Answer: Automatically install depende...
2025-02-15T18:40:11Z
2025-02-15T18:40:11Z
Help with mouse cell type annotation
2025-02-15T13:43:29Z
2025-02-15T13:43:29Z
Automatically install dependencies
2025-02-15T13:02:20Z
2025-02-15T13:02:20Z
Mirror Status
Last updated 2025-02-16T08:05:32-05:00. (Will be updated every 24 hours).
To use a Bioconductor mirror use the R function `chooseBioCmirror()`| URL | Mirror | Release | Devel |
|---|---|---|---|
| https://bioconductor.org/ | yes | yes | yes |
| https://bioconductor.posit.co/ | yes | yes | yes |
| https://bioconductor.statistik.tu-dortmund.de/ | yes | yes | yes |
| https://ftp.gwdg.de/pub/misc/bioconductor/ | yes | yes | yes |
| https://bioconductor.riken.jp/ | yes | yes | yes |
| https://free.nchc.org.tw/bioconductor/ | yes | no | no |
| https://mirrors.tuna.tsinghua.edu.cn/bioconductor/ | yes | yes | yes |
| https://mirrors.nju.edu.cn/bioconductor/ | yes | yes | yes |
| https://mirrors.ustc.edu.cn/bioc/ | yes | no | no |
| https://mirrors.westlake.edu.cn/bioconductor | no | yes | no |
| https://mirrors.zju.edu.cn/bioconductor | no | yes | yes |
| https://bioconductor.uib.no/ | yes | yes | yes |
| https://bioconductor.unipi.it | no | no | no |
| https://cran.asia | no | yes | yes |
| https://mirror.aarnet.edu.au/pub/bioconductor | no | no | no |
| https://mirrors.dotsrc.org/bioconductor/ | yes | yes | yes |
| https://mirror.accum.se/mirror/bioconductor.org/ | yes | yes | yes |