BayesPeak

Bayesian Analysis of ChIP-seq Data

Bioconductor version: Release (2.7)

This package is an implementation of the BayesPeak algorithm for peak calling in ChIP-seq data.

Author: Christiana Spyrou, Jonathan Cairns, Rory Stark, Andy Lynch, Simon Tavar\\'{e},

Maintainer: Jonathan Cairns

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("BayesPeak")    

Documentation

PDF R Script BayesPeak Vignette
PDF regionOFdiag.pdf

Reference Manual

Details

biocViews ChIPseq
Depends IRanges
Imports IRanges, graphics
Suggests
System Requirements
License GPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.2.3

Package Downloads

Package Source BayesPeak_1.2.3.tar.gz
Windows Binary BayesPeak_1.2.3.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary BayesPeak_1.2.3.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center