affyPara

Parallelized preprocessing methods for Affymetrix Oligonucleotide Arrays

Bioconductor version: Release (2.7)

The package contains parallelized functions for exploratory oligonucleotide array analysis. The package is designed for large numbers of microarray data.

Author: Markus Schmidberger, Esmeralda Vicedo, Ulrich Mansmann

Maintainer: Markus Schmidberger

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("affyPara")    

Documentation

PDF	R Script	Parallelized affy functions for preprocessing
PDF	R Script	Simulation Study for VSN Add-On Normalization and Subsample Size

Reference Manual

Details

biocViews	Microarray, Preprocessing
Depends	R, methods, affy, snow, vsn, aplpack
Imports
Suggests	affydata
System Requirements
License	GPL-3
URL	http://www.ibe.med.uni-muenchen.de
Depends On Me
Imports Me
Suggests Me
Version	1.10.0

Package Downloads

Package Source	affyPara_1.10.0.tar.gz
Windows Binary	affyPara_1.10.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	affyPara_1.10.0.tgz
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