Bioconductor version: Release (2.7)
Class definitions for two-color spotted microarray data. Fuctions for data input, diagnostic plots, normalization and quality checking.
Author: Yee Hwa (Jean) Yang with contributions from Agnes Paquet and Sandrine Dudoit.
Maintainer: Yee Hwa (Jean) Yang
To install this package, start R and enter:
source("http:///biocLite.R") biocLite("marray")
ExampleHTML.pdf | ||
R Script | marray Normalization | |
R Script | marray Overview | |
R Script | marrayClasses Overview | |
R Script | marrayClasses Tutorial (short) | |
R Script | marrayInput Introduction | |
R Script | marrayPlots Overview | |
widget1.pdf |
biocViews | Microarray, TwoChannel, Preprocessing |
Depends | R, limma, methods |
Imports | |
Suggests | tkWidgets |
System Requirements | |
License | LGPL |
URL | http://www.maths.usyd.edu.au/u/jeany/ |
Depends On Me | CGHbase, OLIN, RMAGEML, convert, dyebias, maigesPack, nnNorm, stepNorm |
Imports Me | GeneTraffic, OLIN, OLINgui, arrayQualityMetrics, arrayQuality, nnNorm, stepNorm, timecourse |
Suggests Me | Agi4x44PreProcess, AgiMicroRna, DEGraph, Mfuzz, hexbin |
Version | 1.28.0 |
Package Source | marray_1.28.0.tar.gz |
Windows Binary | marray_1.28.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | marray_1.28.0.tgz |
Package Downloads Report | Download Stats |
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