ontoCAT

Ontology parsing

Bioconductor version: Release (2.7)

The ontoCAT package provides a simple interface to ontology described in OWL or OBO format. Package can load the ontology from a local file or on the fly from a URL. Number of functions allow to parse an ontology, search terms in it, find out term parents and children.

Author: Misha Kapushevsky, Pavel Kurnosov, Natalja Kurbatova

Maintainer: Natalja Kurbatova

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("ontoCAT")    

Documentation

PDF

R Script

ontoCAT package

Reference Manual

Details

biocViews	Classification, DataRepresentation
Depends	rJava, methods
Imports
Suggests
System Requirements
License	Apache License
URL
Depends On Me
Imports Me
Suggests Me
Version	1.0.0

Package Downloads

Package Source	ontoCAT_1.0.0.tar.gz
Windows Binary	ontoCAT_1.0.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary
Package Downloads Report	Download Stats