Functions that are needed by many other packages or which
replace R functions.
Author: R. Gentleman, V. Carey, M. Morgan, S. Falcon
| biocViews |
Infrastructure, Bioinformatics |
| Depends |
R, methods, utils |
| Imports |
|
| Suggests |
tools, tkWidgets, ALL |
| System Requirements |
|
| License |
Artistic-2.0 |
| URL |
|
| Depends On Me |
ACME, Agi4x44PreProcess, AgiMicroRna, AnnotationDbi, ArrayExpress, ArrayTools, BicARE, BioMVCClass, BioNet, BiocCaseStudies, CGHbase, CGHcall, CGHregions, CMA, Category, DESeq, DFP, EBarrays, ExiMiR, GEOquery, GGBase, GGtools, GOstats, GSEABase, GSEAlm, GeneAnswers, GeneMeta, GeneRegionScan, GeneSelectMMD, GeneSpring, GeneTraffic, HELP, HTqPCR, LMGene, LVSmiRNA, MLInterfaces, MSnbase, MergeMaid, Mfuzz, MiChip, Mulcom, OTUbase, OrderedList, OutlierD, PAnnBuilder, PGSEA, PLPE, PROMISE, R453Plus1Toolbox, RMAGEML, RNAinteract, RTCA, RTools4TB, RbcBook1, RefPlus, Resourcerer, Ringo, Rmagpie, RpsiXML, Rtreemix, SNPchip, SpeCond, TDARACNE, XDE, affyContam, affyPLM, affyQCReport, affy, affycomp, affycoretools, affylmGUI, altcdfenvs, annaffy, arrayMvout, beadarraySNP, beadarray, bgx, bioDist, cellHTS2, cellHTS, charm, clippda, clusterStab, cn.farms, codelink, convert, copa, crlmm, ddCt, dualKS, dyebias, edd, eisa, factDesign, flowClust, flowCore, frma, gaga, geneRecommender, geneplotter, goProfiles, hopach, idiogram, iterativeBMA, lumi, maDB, maSigPro, macat, methylumi, multtest, oligoClasses, oneChannelGUI, ontoTools, panp, pcaMethods, pcot2, pdInfoBuilder, pdmclass, phenoTest, plgem, prada, puma, qpcrNorm, rHVDM, rMAT, rbsurv, reb, safe, siggenes, simpleaffy, spkTools, splicegear, tigre, tilingArray, topGO, tspair, twilight, vsn, webbioc |
| Imports Me |
ABarray, AgiMicroRna, AnnotationDbi, ArrayTools, BioSeqClass, Biostrings, CGHnormaliter, Category, ChromHeatMap, ConsensusClusterPlus, EBarrays, ExiMiR, GEOsubmission, GOstats, GSEABase, GSRI, GeneMeta, GeneRegionScan, GeneSelectMMD, GeneSelector, GeneSpring, GeneTraffic, HEM, HTqPCR, Harshlight, LiquidAssociation, MCRestimate, MiChip, MiPP, OrderedList, PAnnBuilder, PCpheno, PROMISE, R453Plus1Toolbox, Rmagpie, Rtreemix, SAGx, SLGI, SNPchip, ShortRead, TEQC, XDE, aCGH, adSplit, affyQCReport, affy, annotate, annotationTools, arrayQualityMetrics, attract, betr, biocViews, charm, cycle, ecolitk, farms, flowCore, flowFP, flowFlowJo, flowMeans, flowStats, flowUtils, flowViz, frmaTools, frma, gcrma, geneRecommender, genefilter, geneplotter, genomeIntervals, girafe, globaltest, hopach, iFlow, imageHTS, lapmix, lumi, mBPCR, maSigPro, maanova, makePlatformDesign, makecdfenv, metaArray, methylumi, multiscan, oligo, panp, plateCore, plier, ppiStats, prada, puma, pvac, qpgraph, rMAT, rflowcyt, rnaSeqMap, safe, simpleaffy, spkTools, splicegear, tigre, timecourse, topGO, twilight, webbioc, xmapcore |
| Suggests Me |
BSgenome, BiocCaseStudies, Category, GlobalAncova, ROC, annotate, betr, biocDatasets, biocViews, farms, genefilter, geneplotter, globaltest, hexbin, les, nem, pkgDepTools, survcomp, tkWidgets, vbmp, widgetTools |
| Version |
2.11.10 |
