Vega

An R package for copy number data segmentation

Bioconductor version: Development (2.8)

Vega (Variational Estimator for Genomic Aberrations) is an algorithm that adapts a very popular variational model (Mumford and Shah) used in image segmentation so that chromosomal aberrant regions can be efficiently detected.

Author: Sandro Morganella

Maintainer: Sandro Morganella

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("Vega")    

Documentation

PDF

R Script

Vega

Reference Manual

Details

biocViews	aCGH, DNACopyNumber
Depends
Imports
Suggests
System Requirements
License	GPL-2
URL
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Version	0.99.2

Package Downloads

Package Source	Vega_0.99.2.tar.gz
Windows Binary	Vega_0.99.2.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	Vega_0.99.2.tgz
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