ontoCAT

Ontology traversal and search

Bioconductor version: Development (2.8)

The ontoCAT R package provides a simple interface to ontologies described in widely used standard formats, stored locally in the filesystem or accessible online. The full version of ontoCAT R package also supports searching for ontology terms across multiple ontologies and in major ontology repositories, as well as a number of advanced ontology navigation functions: www.ontocat.org/wiki/r

Author: Natalja Kurbatova, Tomasz Adamusiak, Pavel Kurnosov, Morris Swertz, Misha Kapushevsky

Maintainer: Natalja Kurbatova

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("ontoCAT")    

Documentation

PDF

R Script

ontoCAT package

Reference Manual

Details

biocViews	Classification, DataRepresentation
Depends	rJava, methods
Imports
Suggests
System Requirements
License	Apache License 2.0
URL
Depends On Me
Imports Me
Suggests Me
Version	1.1.3

Package Downloads

Package Source	ontoCAT_1.1.3.tar.gz
Windows Binary	ontoCAT_1.1.3.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	ontoCAT_1.1.3.tgz
Package Downloads Report	Download Stats