Bioconductor AnnotationData Packages
Bioconductor version: Development (2.8)
| Package | Maintainer | Title |
|---|---|---|
| adme16cod.db | Diego Diez |
GE CodeLink ADME Rat 16-Assay Bioarray annotation data (chip adme16cod) |
| ag.db | Biocore Data Team |
Affymetrix Arabidopsis Genome Array annotation data (chip ag) |
| agcdf | Biocore Data Team |
agcdf |
| agprobe | Biocore Data Team |
Probe sequence data for microarrays of type ag |
| anopheles.db0 | Biocore Data Team |
Base Level Annotation databases for anopheles |
| arabidopsis.db0 | Biocore Data Team |
Base Level Annotation databases for arabidopsis |
| ath1121501.db | Biocore Data Team |
Affymetrix Arabidopsis ATH1 Genome Array annotation data (chip ath1121501) |
| ath1121501cdf | Biocore Data Team |
ath1121501cdf |
| ath1121501probe | Biocore Data Team |
Probe sequence data for microarrays of type ath1121501 |
| barley1cdf | Biocore Data Team |
barley1cdf |
| barley1probe | Biocore Data Team |
Probe sequence data for microarrays of type barley1 |
| bovine.db | Biocore Data Team |
Affymetrix bovine annotation data (chip bovine) |
| bovine.db0 | Biocore Data Team |
Base Level Annotation databases for bovine |
| bovinecdf | Biocore Data Team |
bovinecdf |
| bovineprobe | Biocore Data Team |
Probe sequence data for microarrays of type bovine |
| BSgenome.Amellifera.BeeBase.assembly4 | Biocore Team c/o BioC user list
|
Apis mellifera (Honey Bee) full genome (BeeBase assembly4) |
| BSgenome.Amellifera.UCSC.apiMel2 | Biocore Team c/o BioC user list
|
Apis mellifera (Honey Bee) full genome (UCSC version apiMel2) |
| BSgenome.Athaliana.TAIR.04232008 | Biocore Team c/o BioC user list
|
Arabidopsis thaliana full genome (TAIR version from April 23, 2008) |
| BSgenome.Athaliana.TAIR.TAIR9 | Biocore Team c/o BioC user list
|
Arabidopsis thaliana full genome (TAIR9) |
| BSgenome.Btaurus.UCSC.bosTau3 | Biocore Team c/o BioC user list
|
Bos taurus (Cow) full genome (UCSC version bosTau3) |
| BSgenome.Btaurus.UCSC.bosTau4 | Biocore Team c/o BioC user list
|
Bos taurus (Cow) full genome (UCSC version bosTau4) |
| BSgenome.Celegans.UCSC.ce2 | Biocore Team c/o BioC user list
|
Caenorhabditis elegans (Worm) full genome (UCSC version ce2) |
| BSgenome.Celegans.UCSC.ce6 | Biocore Team c/o BioC user list
|
Caenorhabditis elegans (Worm) full genome (UCSC version ce6) |
| BSgenome.Cfamiliaris.UCSC.canFam2 | Biocore Team c/o BioC user list
|
Canis lupus familiaris full genome (UCSC version canFam2) |
| BSgenome.Dmelanogaster.UCSC.dm2 | Biocore Team c/o BioC user list
|
Drosophila melanogaster (Fly) full genome (UCSC version dm2) |
| BSgenome.Dmelanogaster.UCSC.dm3 | Biocore Team c/o BioC user list
|
Drosophila melanogaster (Fly) full genome (UCSC version dm3) |
| BSgenome.Drerio.UCSC.danRer5 | Biocore Team c/o BioC user list
|
Danio rerio (Zebrafish) full genome (UCSC version danRer5) |
| BSgenome.Drerio.UCSC.danRer6 | Biocore Team c/o BioC user list
|
Danio rerio (Zebrafish) full genome (UCSC version danRer6) |
| BSgenome.Drerio.UCSC.danRer7 | Biocore Team c/o BioC user list
|
Danio rerio (Zebrafish) full genome (UCSC version danRer7) |
| BSgenome.Ecoli.NCBI.20080805 | Biocore Team c/o BioC user list
|
Escherichia coli full genomes |
| BSgenome.Gaculeatus.UCSC.gasAcu1 | Biocore Team c/o BioC user list
|
Gasterosteus aculeatus (Stickleback) full genome (UCSC version gasAcu1) |
| BSgenome.Ggallus.UCSC.galGal3 | Biocore Team c/o BioC user list
|
Gallus gallus (Chicken) full genome (UCSC version galGal3) |
| BSgenome.Hsapiens.UCSC.hg17 | Biocore Team c/o BioC user list
|
Homo sapiens (Human) full genome (UCSC version hg17) |
| BSgenome.Hsapiens.UCSC.hg18 | Biocore Team c/o BioC user list
|
Homo sapiens (Human) full genome (UCSC version hg18) |
| BSgenome.Hsapiens.UCSC.hg19 | Biocore Team c/o BioC user list
|
Homo sapiens (Human) full genome (UCSC version hg19) |
| BSgenome.Mmusculus.UCSC.mm8 | Biocore Team c/o BioC user list
|
Mus musculus (Mouse) full genome (UCSC version mm8) |
| BSgenome.Mmusculus.UCSC.mm9 | Biocore Team c/o BioC user list
|
Mus musculus (Mouse) full genome (UCSC version mm9) |
| BSgenome.Ptroglodytes.UCSC.panTro2 | Biocore Team c/o BioC user list
|
Pan troglodytes (Chimp) full genome (UCSC version panTro2) |
| BSgenome.Rnorvegicus.UCSC.rn4 | Biocore Team c/o BioC user list
|
Rattus norvegicus (Rat) full genome (UCSC version rn4) |
| BSgenome.Scerevisiae.UCSC.sacCer1 | Biocore Team c/o BioC user list
|
Saccharomyces cerevisiae (Yeast) full genome (UCSC version sacCer1) |
| BSgenome.Scerevisiae.UCSC.sacCer2 | Biocore Team c/o BioC user list
|
Saccharomyces cerevisiae (Yeast) full genome (UCSC version sacCer2) |
| bsubtiliscdf | Biocore Data Team |
bsubtiliscdf |
| bsubtilisprobe | Biocore Data Team |
Probe sequence data for microarrays of type bsubtilis |
| canine.db | Biocore Data Team |
Affymetrix canine annotation data (chip canine) |
| canine.db0 | Biocore Data Team |
Base Level Annotation databases for canine |
| canine2.db | Biocore Data Team |
Affymetrix canine2 annotation data (chip canine2) |
| canine2cdf | Biocore Data Team |
canine2cdf |
| canine2probe | Biocore Data Team |
Probe sequence data for microarrays of type canine2 |
| caninecdf | Biocore Data Team |
caninecdf |
| canineprobe | Biocore Data Team |
Probe sequence data for microarrays of type canine |
| celegans.db | Biocore Data Team |
Affymetrix celegans annotation data (chip celegans) |
| celeganscdf | Biocore Data Team |
celeganscdf |
| celegansprobe | Biocore Data Team |
Probe sequence data for microarrays of type celegans |
| chicken.db | Biocore Data Team |
Affymetrix chicken annotation data (chip chicken) |
| chicken.db0 | Biocore Data Team |
Base Level Annotation databases for chicken |
| chickencdf | Biocore Data Team |
chickencdf |
| chickenprobe | Biocore Data Team |
Probe sequence data for microarrays of type chicken |
| chimp.db0 | Biocore Data Team |
Base Level Annotation databases for chimp |
| citruscdf | Biocore Data Team |
citruscdf |
| citrusprobe | Biocore Data Team |
Probe sequence data for microarrays of type citrus |
| cottoncdf | Biocore Data Team |
cottoncdf |
| cottonprobe | Biocore Data Team |
Probe sequence data for microarrays of type cotton |
| cyp450cdf | Biocore Data Team |
cyp450cdf |
| DO.db | Jiang Li |
A set of annotation maps describing the entire Disease Ontology |
| drosgenome1.db | Biocore Data Team |
Affymetrix Drosophila Genome Array annotation data (chip drosgenome1) |
| drosgenome1cdf | Biocore Data Team |
drosgenome1cdf |
| drosgenome1probe | Biocore Data Team |
Probe sequence data for microarrays of type drosgenome1 |
| drosophila2.db | Biocore Data Team |
Affymetrix Drosophila Genome 2.0 Array annotation data (chip drosophila2) |
| drosophila2cdf | Biocore Data Team |
drosophila2cdf |
| drosophila2probe | Biocore Data Team |
Probe sequence data for microarrays of type drosophila2 |
| ecoli2.db | Biocore Data Team |
Affymetrix E. coli Genome 2.0 Array annotation data (chip ecoli2) |
| ecoli2cdf | Biocore Data Team |
ecoli2cdf |
| ecoli2probe | Biocore Data Team |
Probe sequence data for microarrays of type ecoli2 |
| ecoliasv2cdf | Biocore Data Team |
ecoliasv2cdf |
| ecoliasv2probe | Biocore Data Team |
Probe sequence data for microarrays of type ecoliasv2 |
| ecolicdf | Biocore Data Team |
ecolicdf |
| ecoliK12.db0 | Biocore Data Team |
Base Level Annotation databases for E coli K12 Strain |
| ecoliprobe | Biocore Data Team |
Probe sequence data for microarrays of type ecoli |
| ecoliSakai.db0 | Biocore Data Team |
Base Level Annotation databases for E coli Sakai Strain |
| fly.db0 | Biocore Data Team |
Base Level Annotation databases for fly |
| gahgu133a.db | Francesco Ferrari |
Genecards derived annotations for gahgu133a custom probeset definitions |
| gahgu133acdf | Francesco Ferrari |
gahgu133acdf |
| gahgu133aprobe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu133a |
| gahgu133b.db | Francesco Ferrari |
Genecards derived annotations for gahgu133b custom probeset definitions |
| gahgu133bcdf | Francesco Ferrari |
gahgu133bcdf |
| gahgu133bprobe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu133b |
| gahgu133plus2.db | Francesco Ferrari |
Genecards derived annotations for gahgu133plus2 custom probeset definitions |
| gahgu133plus2cdf | Francesco Ferrari |
gahgu133plus2cdf |
| gahgu133plus2probe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu133plus2 |
| gahgu95av2.db | Francesco Ferrari |
Genecards derived annotations for gahgu95av2 custom probeset definitions |
| gahgu95av2cdf | Francesco Ferrari |
gahgu95av2cdf |
| gahgu95av2probe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu95av2 |
| gahgu95b.db | Francesco Ferrari |
Genecards derived annotations for gahgu95b custom probeset definitions |
| gahgu95bcdf | Francesco Ferrari |
gahgu95bcdf |
| gahgu95bprobe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu95b |
| gahgu95c.db | Francesco Ferrari |
Genecards derived annotations for gahgu95c custom probeset definitions |
| gahgu95ccdf | Francesco Ferrari |
gahgu95ccdf |
| gahgu95cprobe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu95c |
| gahgu95d.db | Francesco Ferrari |
Genecards derived annotations for gahgu95d custom probeset definitions |
| gahgu95dcdf | Francesco Ferrari |
gahgu95dcdf |
| gahgu95dprobe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu95d |
| gahgu95e.db | Francesco Ferrari |
Genecards derived annotations for gahgu95e custom probeset definitions |
| gahgu95ecdf | Francesco Ferrari |
gahgu95ecdf |
| gahgu95eprobe | Francesco Ferrari |
Probe sequence data for microarrays of type gahgu95e |
| genomewidesnp6Crlmm | Benilton S Carvalho |
Metadata for fast genotyping with the 'crlmm' package |
| GGHumanMethCancerPanelv1.db | Sean Davis |
Illumina Golden Gate Human Methylation Cancer Panel Version 1 annotation data (chip GGHumanMethCancerPanelv1) |
| GO.db | Biocore Data Team |
A set of annotation maps describing the entire Gene Ontology |
| gp53cdf | Biocore Data Team |
gp53cdf |
| h10kcod.db | Diego Diez |
GE CodeLink UniSet Human I Bioarray (~10 000 human genes) annotation data (chip h10kcod) |
| h20kcod.db | Diego Diez |
GE CodeLink UniSet Human 20k I Bioarray annotation data (chip h20kcod) |
| hapmap370k | Matthew Ritchie |
Example Illumina 370k HapMap Data |
| hcg110.db | Biocore Data Team |
Affymetrix Human Cancer G110 Array annotation data (chip hcg110) |
| hcg110cdf | Biocore Data Team |
hcg110cdf |
| hcg110probe | Biocore Data Team |
Probe sequence data for microarrays of type hcg110 |
| hgfocus.db | Biocore Data Team |
Affymetrix Human Genome Focus Array annotation data (chip hgfocus) |
| hgfocuscdf | Biocore Data Team |
hgfocuscdf |
| hgfocusprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgfocus |
| hgu133a.db | Biocore Data Team |
Affymetrix Human Genome U133 Set annotation data (chip hgu133a) |
| hgu133a2.db | Biocore Data Team |
Affymetrix Human Genome U133A 2.0 Array annotation data (chip hgu133a2) |
| hgu133a2cdf | Biocore Data Team |
hgu133a2cdf |
| hgu133a2probe | Biocore Data Team |
Probe sequence data for microarrays of type hgu133a2 |
| hgu133acdf | Biocore Data Team |
hgu133acdf |
| hgu133aprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu133a |
| hgu133atagcdf | Biocore Data Team |
hgu133atagcdf |
| hgu133atagprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu133atag |
| hgu133b.db | Biocore Data Team |
Affymetrix Human Genome U133 Set annotation data (chip hgu133b) |
| hgu133bcdf | Biocore Data Team |
hgu133bcdf |
| hgu133bprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu133b |
| hgu133plus2.db | Biocore Data Team |
Affymetrix Human Genome U133 Plus 2.0 Array annotation data (chip hgu133plus2) |
| hgu133plus2cdf | Biocore Data Team |
hgu133plus2cdf |
| hgu133plus2probe | Biocore Data Team |
Probe sequence data for microarrays of type hgu133plus2 |
| hgu219.db | Biocore Data Team |
Affymetrix Human Genome 219 Plate annotation data (chip hgu219) |
| hgu219cdf | Biocore Data Team |
hgu219cdf |
| hgu219probe | Biocore Data Team |
Probe sequence data for microarrays of type hgu219 |
| hgu95a.db | Biocore Data Team |
Affymetrix Human Genome U95 Set annotation data (chip hgu95a) |
| hgu95acdf | Biocore Data Team |
hgu95acdf |
| hgu95aprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu95a |
| hgu95av2 | Biocore Data Team |
Affymetrix Human Genome U95 Set Annotation Data (hgu95av2) |
| hgu95av2.db | Biocore Data Team |
Affymetrix Human Genome U95 Set annotation data (chip hgu95av2) |
| hgu95av2cdf | Biocore Data Team |
hgu95av2cdf |
| hgu95av2probe | Biocore Data Team |
Probe sequence data for microarrays of type hgu95av2 |
| hgu95b.db | Biocore Data Team |
Affymetrix Human Genome U95 Set annotation data (chip hgu95b) |
| hgu95bcdf | Biocore Data Team |
hgu95bcdf |
| hgu95bprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu95b |
| hgu95c.db | Biocore Data Team |
Affymetrix Human Genome U95 Set annotation data (chip hgu95c) |
| hgu95ccdf | Biocore Data Team |
hgu95ccdf |
| hgu95cprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu95c |
| hgu95d.db | Biocore Data Team |
Affymetrix Human Genome U95 Set annotation data (chip hgu95d) |
| hgu95dcdf | Biocore Data Team |
hgu95dcdf |
| hgu95dprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu95d |
| hgu95e.db | Biocore Data Team |
Affymetrix Human Genome U95 Set annotation data (chip hgu95e) |
| hgu95ecdf | Biocore Data Team |
hgu95ecdf |
| hgu95eprobe | Biocore Data Team |
Probe sequence data for microarrays of type hgu95e |
| hguatlas13k.db | Biocore Data Team |
Clontech BD Atlas Long Oligos Human 13K annotation data (chip hguatlas13k) |
| hgubeta7.db | Biocore Data Team |
Unknown annotation data (chip hgubeta7) |
| hguDKFZ31.db | Biocore Data Team |
Unknown annotation data (chip hguDKFZ31) |
| hgug4100a.db | Biocore Data Team |
Agilent Human 1 cDNA Microarray Kit annotation data (chip hgug4100a) |
| hgug4101a.db | Biocore Data Team |
Agilent Human 2 cDNA Microarry Kit annotation data (chip hgug4101a) |
| hgug4110b.db | Biocore Data Team |
Agilent Human 1A (V2) annotation data (chip hgug4110b) |
| hgug4111a.db | Biocore Data Team |
Agilent Human 1B annotation data (chip hgug4111a) |
| hgug4112a.db | Biocore Data Team |
Agilent "Human Genome, Whole" annotation data (chip hgug4112a) |
| hguqiagenv3.db | Biocore Data Team |
Qiagen Qiagen V3.0 oligo set annotation data (chip hguqiagenv3) |
| hi16cod.db | Diego Diez |
GE CodeLink Human Inflammation 16 Bioarray annotation data (chip hi16cod) |
| hivprtplus2cdf | Biocore Data Team |
hivprtplus2cdf |
| hom.At.inp.db | Biocore Data Team |
Homology information for Arabidopsis thaliana from Inparanoid |
| hom.Ce.inp.db | Biocore Data Team |
Homology information for Caenorhabditis elegans from Inparanoid |
| hom.Dm.inp.db | Biocore Data Team |
Homology information for Drosophila melanogaster from Inparanoid |
| hom.Dr.inp.db | Biocore Data Team |
Homology information for Danio rerio from Inparanoid |
| hom.Hs.inp.db | Biocore Data Team |
Homology information for Homo Sapiens from Inparanoid |
| hom.Mm.inp.db | Biocore Data Team |
Homology information for Mus musculus from Inparanoid |
| hom.Rn.inp.db | Biocore Data Team |
Homology information for Rattus norvegicus from Inparanoid |
| hom.Sc.inp.db | Biocore Data Team |
Homology information for Saccharomyces cerevisiae from Inparanoid |
| hs25kresogen.db | Simon de Bernard |
RNG_MRC Human Pangenomic 25k Set annotation data (chip hs25kresogen) |
| Hs6UG171.db | Biocore Data Team |
A package containing metadata for Hs6UG171 arrays |
| HsAgilentDesign026652.db | Biocore Data Team |
Agilent Chips that use Agilent design number 026652 annotation data (chip HsAgilentDesign026652) |
| hthgu133a.db | Biocore Data Team |
Affymetrix HT Human Genome U133 Array Plate Set annotation data (chip hthgu133a) |
| hthgu133acdf | Biocore Data Team |
hthgu133acdf |
| hthgu133aprobe | Biocore Data Team |
Probe sequence data for microarrays of type hthgu133a |
| hthgu133b.db | Biocore Data Team |
Affymetrix HT Human Genome U133 Array Plate Set annotation data (chip hthgu133b) |
| hthgu133bcdf | Biocore Data Team |
hthgu133bcdf |
| hthgu133bprobe | Biocore Data Team |
Probe sequence data for microarrays of type hthgu133b |
| hthgu133pluspmcdf | Biocore Data Team |
hthgu133pluspmcdf |
| hthgu133pluspmprobe | Biocore Data Team |
Probe sequence data for microarrays of type hthgu133pluspm |
| htmg430acdf | Biocore Data Team |
htmg430acdf |
| htmg430aprobe | Biocore Data Team |
Probe sequence data for microarrays of type htmg430a |
| htmg430bcdf | Biocore Data Team |
htmg430bcdf |
| htmg430bprobe | Biocore Data Team |
Probe sequence data for microarrays of type htmg430b |
| htmg430pmcdf | Biocore Data Team |
htmg430pmcdf |
| htmg430pmprobe | Biocore Data Team |
Probe sequence data for microarrays of type htmg430pm |
| htrat230pmcdf | Biocore Data Team |
htrat230pmcdf |
| htrat230pmprobe | Biocore Data Team |
Probe sequence data for microarrays of type htrat230pm |
| htratfocuscdf | Biocore Data Team |
htratfocuscdf |
| htratfocusprobe | Biocore Data Team |
Probe sequence data for microarrays of type htratfocus |
| hu35ksuba.db | Biocore Data Team |
Affymetrix Human Genome HU35K Set annotation data (chip hu35ksuba) |
| hu35ksubacdf | Biocore Data Team |
hu35ksubacdf |
| hu35ksubaprobe | Biocore Data Team |
Probe sequence data for microarrays of type hu35ksuba |
| hu35ksubb.db | Biocore Data Team |
Affymetrix Human Genome HU35K Set annotation data (chip hu35ksubb) |
| hu35ksubbcdf | Biocore Data Team |
hu35ksubbcdf |
| hu35ksubbprobe | Biocore Data Team |
Probe sequence data for microarrays of type hu35ksubb |
| hu35ksubc.db | Biocore Data Team |
Affymetrix Human Genome HU35K Set annotation data (chip hu35ksubc) |
| hu35ksubccdf | Biocore Data Team |
hu35ksubccdf |
| hu35ksubcprobe | Biocore Data Team |
Probe sequence data for microarrays of type hu35ksubc |
| hu35ksubd.db | Biocore Data Team |
Affymetrix Human Genome HU35K Set annotation data (chip hu35ksubd) |
| hu35ksubdcdf | Biocore Data Team |
hu35ksubdcdf |
| hu35ksubdprobe | Biocore Data Team |
Probe sequence data for microarrays of type hu35ksubd |
| hu6800.db | Biocore Data Team |
Affymetrix HuGeneFL Genome Array annotation data (chip hu6800) |
| hu6800cdf | Biocore Data Team |
hu6800cdf |
| hu6800probe | Biocore Data Team |
Probe sequence data for microarrays of type hu6800 |
| hu6800subacdf | Biocore Data Team |
hu6800subacdf |
| hu6800subbcdf | Biocore Data Team |
hu6800subbcdf |
| hu6800subccdf | Biocore Data Team |
hu6800subccdf |
| hu6800subdcdf | Biocore Data Team |
hu6800subdcdf |
| HuExExonProbesetLocationHg18 | Raffaele A. Calogero |
Exon-level probeset chromosome location for microarrays of type HuEx |
| HuExExonProbesetLocationHg19 | Raffaele A. Calogero |
Exon-level probeset chromosome location for microarrays of type HuEx |
| hugene10stprobeset.db | Li, Arthur |
Affymetrix Human Gene 1.0-ST Probeset Array Revision 7 annotation data (chip hugene10stprobeset) |
| hugene10sttranscriptcluster.db | Li, Arthur |
Affymetrix Human Gene 1.0-ST Array Transcriptcluster Revision 7 annotation data (chip hugene10sttranscriptcluster) |
| hugene10stv1cdf | Biocore Data Team |
hugene10stv1cdf |
| hugene10stv1probe | Biocore Data Team |
Probe sequence data for microarrays of type hugene10stv1 |
| hugene11stprobeset.db | Li, Arthur |
Affymetrix Human Gene 1.1-ST Array Probeset Revision 3 annotation data (chip hugene11stprobeset) |
| hugene11sttranscriptcluster.db | Li, Arthur |
Affymetrix Human Gene 1.1-ST Array Transcriptcluster Revision 3 annotation data (chip hugene11sttranscriptcluster) |
| human.db0 | Biocore Data Team |
Base Level Annotation databases for human |
| human1mduov3bCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| human1mv1cCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| human370quadv3cCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| human370v1cCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| human550v3bCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| human610quadv1bCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| human650v3aCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| human660quadv1aCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| humanCHRLOC | Biocore Data Team |
A data package containing annotation data for humanCHRLOC |
| humanomni1quadv1bCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| humanomniexpress12v1bCrlmm | Matthew Ritchie |
Metadata for fast genotyping with the 'crlmm' package |
| HuO22.db | Biocore Data Team |
FHCRC Genomics Shared Resource HuO22 Annotation Data (HuO22) |
| hwgcod.db | Diego Diez |
GE CodeLink Human Whole Genome Bioarray (~55 000 human genes) annotation data (chip hwgcod) |
| illuminaHumanDASLBeadID.db | Mark Dunning |
Illumina HumanDASL annotation data (chip illuminaHumanDASLBeadID) |
| IlluminaHumanMethylation27k.db | Sean Davis |
Illumina Illumina Human Methylation 27k annotation data (chip IlluminaHumanMethylation27k) |
| illuminaHumanv1.db | Mark Dunning |
Illumina HumanWGv1 annotation data (chip illuminaHumanv1) |
| illuminaHumanv1BeadID.db | Mark Dunning |
Illumina HumanWGv1 annotation data (chip illuminaHumanv1BeadID) |
| illuminaHumanv2.db | Mark Dunning |
Illumina HumanWGv2 annotation data (chip illuminaHumanv2) |
| illuminaHumanv2BeadID.db | Mark Dunning |
Illumina HumanWGv2 annotation data (chip illuminaHumanv2BeadID) |
| illuminaHumanv3.db | Mark Dunning |
Illumina HumanWGv3 annotation data (chip illuminaHumanv3) |
| illuminaHumanv3BeadID.db | Mark Dunning |
Illumina HumanWGv3 annotation data (chip illuminaHumanv3BeadID) |
| illuminaHumanv4.db | Mark Dunning |
Illumina HumanWGv4 annotation data (chip illuminaHumanv4) |
| illuminaHumanv4BeadID.db | Mark Dunning |
Illumina HumanWGv4 annotation data (chip illuminaHumanv4BeadID) |
| illuminaMousev1.db | Mark Dunning |
Illumina MouseWGv1 annotation data (chip illuminaMousev1) |
| illuminaMousev1BeadID.db | Mark Dunning |
Illumina MouseWGv1 annotation data (chip illuminaMousev1BeadID) |
| illuminaMousev1p1.db | Mark Dunning |
Illumina MouseWGv1.1 annotation data (chip illuminaMousev1p1) |
| illuminaMousev1p1BeadID.db | Mark Dunning |
Illumina MouseWGv1.1 annotation data (chip illuminaMousev1p1BeadID) |
| illuminaMousev2.db | Mark Dunning |
Illumina MouseWGv2 annotation data (chip illuminaMousev2) |
| illuminaMousev2BeadID.db | Mark Dunning |
Illumina MouseWGv2 annotation data (chip illuminaMousev2BeadID) |
| illuminaRatv1.db | Mark Dunning |
Illumina RatRSv1 annotation data (chip illuminaRatv1) |
| illuminaRatv1BeadID.db | Mark Dunning |
Illumina RatRSv1 annotation data (chip illuminaRatv1BeadID) |
| indac.db | Biocore Data Team |
INDAC FlyChip_long_oligonucleotide_002 (FL002) annotation data (chip indac) |
| JazaeriMetaData.db | Biocore Data Team |
A data package containing annotation data for JazaeriMetaData |
| KEGG.db | Biocore Data Team |
A set of annotation maps for KEGG |
| LAPOINTE.db | Biocore Data Team |
A package containing metadata for LAPOINTE arrays |
| lumiHumanAll.db | Pan Du |
Illumina Human Expression BeadChips (include all versions: version 1 to 4) annotation data (chip lumiHumanAll) |
| lumiHumanIDMapping | Gilbert Feng |
Illumina Identifier mapping for Human |
| lumiMouseAll.db | Pan Du |
Illumina Mouse Expression BeadChips (include all versions: version 1 to 2) annotation data (chip lumiMouseAll) |
| lumiMouseIDMapping | Gilbert Feng |
Illumina Identifier mapping for Mouse |
| lumiRatAll.db | Pan Du |
Illumina Rat Expression BeadChips (include version: version 1) annotation data (chip lumiRatAll) |
| lumiRatIDMapping | Gilbert Feng |
Illumina Identifier mapping for Rat |
| m10kcod.db | Diego Diez |
GE CodeLink UniSet Mouse I Bioarray (~10 000 mouse gene targets) annotation data (chip m10kcod) |
| m20kcod.db | Diego Diez |
GE CodeLink UniSet Mouse 20k I Bioarray annotation data (chip m20kcod) |
| maizecdf | Biocore Data Team |
maizecdf |
| maizeprobe | Biocore Data Team |
Probe sequence data for microarrays of type maize |
| malaria.db0 | Biocore Data Team |
Base Level Annotation databases for malaria |
| medicagocdf | Biocore Data Team |
medicagocdf |
| medicagoprobe | Biocore Data Team |
Probe sequence data for microarrays of type medicago |
| mgu74a.db | Biocore Data Team |
Affymetrix Murine Genome U74v2 annotation data (chip mgu74a) |
| mgu74acdf | Biocore Data Team |
mgu74acdf |
| mgu74aprobe | Biocore Data Team |
Probe sequence data for microarrays of type mgu74a |
| mgu74av2.db | Biocore Data Team |
Affymetrix Murine Genome U74v2 annotation data (chip mgu74av2) |
| mgu74av2cdf | Biocore Data Team |
mgu74av2cdf |
| mgu74av2probe | Biocore Data Team |
Probe sequence data for microarrays of type mgu74av2 |
| mgu74b.db | Biocore Data Team |
Affymetrix Murine Genome U74v2 annotation data (chip mgu74b) |
| mgu74bcdf | Biocore Data Team |
mgu74bcdf |
| mgu74bprobe | Biocore Data Team |
Probe sequence data for microarrays of type mgu74b |
| mgu74bv2.db | Biocore Data Team |
Affymetrix Murine Genome U74v2 annotation data (chip mgu74bv2) |
| mgu74bv2cdf | Biocore Data Team |
mgu74bv2cdf |
| mgu74bv2probe | Biocore Data Team |
Probe sequence data for microarrays of type mgu74bv2 |
| mgu74c.db | Biocore Data Team |
Affymetrix Murine Genome U74v2 annotation data (chip mgu74c) |
| mgu74ccdf | Biocore Data Team |
mgu74ccdf |
| mgu74cprobe | Biocore Data Team |
Probe sequence data for microarrays of type mgu74c |
| mgu74cv2.db | Biocore Data Team |
Affymetrix Murine Genome U74v2 annotation data (chip mgu74cv2) |
| mgu74cv2cdf | Biocore Data Team |
mgu74cv2cdf |
| mgu74cv2probe | Biocore Data Team |
Probe sequence data for microarrays of type mgu74cv2 |
| mguatlas5k.db | Biocore Data Team |
Clontech BD Atlas Long Oligos Mouse 5K annotation data (chip mguatlas5k) |
| mgug4104a.db | Biocore Data Team |
Agilent annotation data (chip mgug4104a) |
| mgug4120a.db | Biocore Data Team |
Agilent annotation data (chip mgug4120a) |
| mgug4121a.db | Biocore Data Team |
Agilent Mouse annotation data (chip mgug4121a) |
| mgug4122a.db | Biocore Data Team |
Agilent "Mouse Genome, Whole" annotation data (chip mgug4122a) |
| mi16cod.db | Diego Diez |
GE CodeLink Mouse Inflammation 16 Bioarray annotation data (chip mi16cod) |
| mirbase.db | James F. Reid |
miRBase: the microRNA database |
| mirna102xgaincdf | Biocore Data Team |
mirna102xgaincdf |
| mirna10cdf | Biocore Data Team |
mirna10cdf |
| mirna10probe | Biocore Data Team |
Probe sequence data for microarrays of type mirna10 |
| mirna20cdf | Biocore Data Team |
mirna20cdf |
| mm24kresogen.db | Simon de Bernard |
RNG_MRC Mouse Pangenomic 24k Set annotation data (chip mm24kresogen) |
| MmAgilentDesign026655.db | Biocore Data Team |
Agilent Chips that use Agilent design number 026655 annotation data (chip MmAgilentDesign026655) |
| moe430a.db | Biocore Data Team |
Affymetrix Mouse Expression Set 430 annotation data (chip moe430a) |
| moe430acdf | Biocore Data Team |
moe430acdf |
| moe430aprobe | Biocore Data Team |
Probe sequence data for microarrays of type moe430a |
| moe430b.db | Biocore Data Team |
Affymetrix Mouse Expression Set 430 annotation data (chip moe430b) |
| moe430bcdf | Biocore Data Team |
moe430bcdf |
| moe430bprobe | Biocore Data Team |
Probe sequence data for microarrays of type moe430b |
| MoExExonProbesetLocation | Raffaele A. Calogero |
Probe sequence data for microarrays of type MoEx |
| mogene10stprobeset.db | Li, Arthur |
Affymetrix Mouse Gene 1.0-ST Array Probeset Revision 7 annotation data (chip mogene10stprobeset) |
| mogene10sttranscriptcluster.db | Li, Arthur |
Affymetrix Mouse Gene 1.0-ST Array Transcriptcluster Revision 7 annotation data (chip mogene10sttranscriptcluster) |
| mogene10stv1cdf | Biocore Data Team |
mogene10stv1cdf |
| mogene10stv1probe | Biocore Data Team |
Probe sequence data for microarrays of type mogene10stv1 |
| mogene11stprobeset.db | Li, Arthur |
Affymetrix Mouse Gene 1.1-ST Array Probeset Revision 3 annotation data (chip mogene11stprobeset) |
| mogene11sttranscriptcluster.db | Li, Arthur |
Affymetrix Mouse Gene 1.1-ST Array Transcriptcluster Revision 3 annotation data (chip mogene11sttranscriptcluster) |
| mouse.db0 | Biocore Data Team |
Base Level Annotation databases for mouse |
| mouse4302.db | Biocore Data Team |
Affymetrix Mouse Genome 430 2.0 Array annotation data (chip mouse4302) |
| mouse4302cdf | Biocore Data Team |
mouse4302cdf |
| mouse4302probe | Biocore Data Team |
Probe sequence data for microarrays of type mouse4302 |
| mouse430a2.db | Biocore Data Team |
Affymetrix Mouse Genome 430A 2.0 Array annotation data (chip mouse430a2) |
| mouse430a2cdf | Biocore Data Team |
mouse430a2cdf |
| mouse430a2probe | Biocore Data Team |
Probe sequence data for microarrays of type mouse430a2 |
| mouseCHRLOC | Biocore Data Team |
A data package containing annotation data for mouseCHRLOC |
| mpedbarray.db | Biocore Data Team |
FHCRC Nelson Lab mpedbarray Annotation Data (mpedbarray) |
| mu11ksuba.db | Biocore Data Team |
Affymetrix Murine 11K Set annotation data (chip mu11ksuba) |
| mu11ksubacdf | Biocore Data Team |
mu11ksubacdf |
| mu11ksubaprobe | Biocore Data Team |
Probe sequence data for microarrays of type mu11ksuba |
| mu11ksubb.db | Biocore Data Team |
Affymetrix Murine 11K Set annotation data (chip mu11ksubb) |
| mu11ksubbcdf | Biocore Data Team |
mu11ksubbcdf |
| mu11ksubbprobe | Biocore Data Team |
Probe sequence data for microarrays of type mu11ksubb |
| Mu15v1.db | Biocore Data Team |
FHCRC Genomics Shared Resource Mu15v1 Annotation Data (Mu15v1) |
| mu19ksuba.db | Biocore Data Team |
Affymetrix Murine Genome 19k Set annotation data (chip mu19ksuba) |
| mu19ksubacdf | Biocore Data Team |
mu19ksubacdf |
| mu19ksubb.db | Biocore Data Team |
Affymetrix Murine Genome 19k Set annotation data (chip mu19ksubb) |
| mu19ksubbcdf | Biocore Data Team |
mu19ksubbcdf |
| mu19ksubc.db | Biocore Data Team |
Affymetrix Murine Genome 19k Set annotation data (chip mu19ksubc) |
| mu19ksubccdf | Biocore Data Team |
mu19ksubccdf |
| Mu22v3.db | Biocore Data Team |
FHCRC Genomics Shared Resource Mu22v3 Annotation Data (Mu22v3) |
| mu6500subacdf | Biocore Data Team |
mu6500subacdf |
| mu6500subbcdf | Biocore Data Team |
mu6500subbcdf |
| mu6500subccdf | Biocore Data Team |
mu6500subccdf |
| mu6500subdcdf | Biocore Data Team |
mu6500subdcdf |
| mwgcod.db | Diego Diez |
GE CodeLink Mouse Whole Genome Bioarray (~36 000 mouse gene targets) annotation data (chip mwgcod) |
| Norway981.db | Biocore Data Team |
Norway981 http://genome-www5.stanford.edu/ Annotation Data (Norway981) |
| nugohs1a520180.db | Philip de Groot |
Affymetrix nugohs1a520180 annotation data (chip nugohs1a520180) |
| nugohs1a520180cdf | Philip de Groot |
nugohs1a520180cdf |
| nugohs1a520180probe | Philip de Groot |
Probe sequence data for microarrays of type nugohs1a520180 |
| nugomm1a520177.db | Philip de Groot |
Affymetrix nugomm1a520177 annotation data (chip nugomm1a520177) |
| nugomm1a520177cdf | Philip de Groot |
nugomm1a520177cdf |
| nugomm1a520177probe | Philip de Groot |
Probe sequence data for microarrays of type nugomm1a520177 |
| oligoData | Benilton Carvalho |
Dataset samples for the oligo package |
| OperonHumanV3.db | Biocore Data Team |
FHCRC Nelson Lab OperonHumanV3 Annotation Data (OperonHumanV3) |
| org.Ag.eg.db | Biocore Data Team |
Genome wide annotation for Anopheles |
| org.At.tair.db | Biocore Data Team |
Genome wide annotation for Arabidopsis |
| org.Bt.eg.db | Biocore Data Team |
Genome wide annotation for Bovine |
| org.Ce.eg.db | Biocore Data Team |
Genome wide annotation for Worm |
| org.Cf.eg.db | Biocore Data Team |
Genome wide annotation for Canine |
| org.Dm.eg.db | Biocore Data Team |
Genome wide annotation for Fly |
| org.Dr.eg.db | Biocore Data Team |
Genome wide annotation for Zebrafish |
| org.EcK12.eg.db | Biocore Data Team |
Genome wide annotation for E coli strain K12 |
| org.EcSakai.eg.db | Biocore Data Team |
Genome wide annotation for E coli strain Sakai |
| org.Gg.eg.db | Biocore Data Team |
Genome wide annotation for Chicken |
| org.Hs.eg.db | Biocore Data Team |
Genome wide annotation for Human |
| org.Hs.ipi.db | Hong Li |
A data package containing annotation data for org.Hs.ipi.db |
| org.Mm.eg.db | Biocore Data Team |
Genome wide annotation for Mouse |
| org.Mmu.eg.db | Biocore Data Team |
Genome wide annotation for Rhesus |
| org.Pf.plasmo.db | Biocore Data Team |
Genome wide annotation for Malaria |
| org.Pt.eg.db | Biocore Data Team |
Genome wide annotation for Chimp |
| org.Rn.eg.db | Biocore Data Team |
Genome wide annotation for Rat |
| org.Sc.sgd.db | Biocore Data Team |
Genome wide annotation for Yeast |
| org.Sco.eg.db | Roxane Legaie |
Genome wide annotation for Streptomyces coelicolor |
| org.Ss.eg.db | Biocore Data Team |
Genome wide annotation for Pig |
| org.Xl.eg.db | Biocore Data Team |
Genome wide annotation for Xenopus |
| paeg1acdf | Biocore Data Team |
paeg1acdf |
| paeg1aprobe | Biocore Data Team |
Probe sequence data for microarrays of type paeg1a |
| PartheenMetaData.db | Biocore Data Team |
PartheenMetaData http://swegene.onk.lu.se Annotation Data (PartheenMetaData) |
| pd.081229.hg18.promoter.medip.hx1 | Martin Aryee |
Platform Design Info for NimbleGen 081229_hg18_promoter_medip_hx1 |
| pd.2006.07.18.hg18.refseq.promoter | Benilton Carvalho |
Platform Design Info for NimbleGen 2006-07-18_hg18_refseq_promoter |
| pd.2006.07.18.mm8.refseq.promoter | Martin Aryee |
Platform Design Info for NimbleGen 2006-07-18_mm8_refseq_promoter |
| pd.2006.10.31.rn34.refseq.promoter | Martin Aryee |
Platform Design Info for NimbleGen 2006-10-31_rn34_refseq_promoter |
| pd.charm.hg18.example | Martin Aryee |
Platform Design Info for NimbleGen charm_hg18_example |
| pd.cytogenetics.array | Benilton Carvalho |
Platform Design Info for Affymetrix Cytogenetics_Array |
| pd.feinberg.hg18.me.hx1 | Martin Aryee |
Platform Design Info for NimbleGen feinberg_hg18_me_hx1 |
| pd.feinberg.mm8.me.hx1 | Martin Aryee |
Platform Design Info for NimbleGen feinberg_mm8_me_hx1 |
| pd.genomewidesnp.5 | Benilton Carvalho |
Platform Design Info for Affymetrix GenomeWideSNP_5 |
| pd.genomewidesnp.6 | Benilton Carvalho |
Platform Design Info for Affymetrix GenomeWideSNP_6 |
| pd.hg.u95a | Benilton Carvalho |
Platform Design Info for The Manufacturer's Name HG_U95A |
| pd.hg.u95av2 | Benilton Carvalho |
Platform Design Info for The Manufacturer's Name HG_U95Av2 |
| pd.hg18.60mer.expr | Benilton Carvalho |
Platform Design Info for NimbleGen hg18_60mer_expr |
| pd.ht.hg.u133.plus.pm | Benilton Carvalho |
Platform Design Info for The Manufacturer's Name HT_HG-U133_Plus_PM |
| pd.huex.1.0.st.v2 | Benilton Carvalho |
Platform Design Info for Affymetrix HuEx-1_0-st-v2 |
| pd.hugene.1.0.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix HuGene-1_0-st-v1 |
| pd.hugene.1.1.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix HuGene-1_1-st-v1 |
| pd.mapping250k.nsp | Benilton Carvalho |
Platform Design Info for Affymetrix Mapping250K_Nsp |
| pd.mapping250k.sty | Benilton Carvalho |
Platform Design Info for Affymetrix Mapping250K_Sty |
| pd.mapping50k.hind240 | Benilton Carvalho |
Platform Design Info for Affymetrix Mapping50K_Hind240 |
| pd.mapping50k.xba240 | Benilton Carvalho |
Platform Design Info for Affymetrix Mapping50K_Xba240 |
| pd.moex.1.0.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix MoEx-1_0-st-v1 |
| pd.mogene.1.0.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix MoGene-1_0-st-v1 |
| pd.mogene.1.1.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix MoGene-1_1-st-v1 |
| pd.mouse430.2 | Benilton Carvalho |
Platform Design Info for The Manufacturer's Name Mouse430_2 |
| pd.raex.1.0.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix RaEx-1_0-st-v1 |
| pd.ragene.1.0.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix RaGene-1_0-st-v1 |
| pd.ragene.1.1.st.v1 | Benilton Carvalho |
Platform Design Info for Affymetrix RaGene-1_1-st-v1 |
| pedbarrayv10.db | Biocore Data Team |
FHCRC Nelson Lab pedbarrayv10 Annotation Data (pedbarrayv10) |
| pedbarrayv9.db | Biocore Data Team |
FHCRC Nelson Lab pedbarrayv9 Annotation Data (pedbarrayv9) |
| PFAM.db | Biocore Data Team |
A set of protein ID mappings for PFAM |
| pig.db0 | Biocore Data Team |
Base Level Annotation databases for pig |
| plasmodiumanophelescdf | Biocore Data Team |
plasmodiumanophelescdf |
| plasmodiumanophelesprobe | Biocore Data Team |
Probe sequence data for microarrays of type plasmodiumanopheles |
| POCRCannotation.db | Biocore Data Team |
A package containing metadata for POCRC arrays |
| poplarcdf | Biocore Data Team |
poplarcdf |
| poplarprobe | Biocore Data Team |
Probe sequence data for microarrays of type poplar |
| porcine.db | Biocore Data Team |
Affymetrix porcine annotation data (chip porcine) |
| porcinecdf | Biocore Data Team |
porcinecdf |
| porcineprobe | Biocore Data Team |
Probe sequence data for microarrays of type porcine |
| r10kcod.db | Diego Diez |
GE CodeLink UniSet Rat I Bioarray (~10 000 rat gene targets) annotation data (chip r10kcod) |
| rae230a.db | Biocore Data Team |
Affymetrix Rat Expression Set 230 annotation data (chip rae230a) |
| rae230acdf | Biocore Data Team |
rae230acdf |
| rae230aprobe | Biocore Data Team |
Probe sequence data for microarrays of type rae230a |
| rae230b.db | Biocore Data Team |
Affymetrix Rat Expression Set 230 annotation data (chip rae230b) |
| rae230bcdf | Biocore Data Team |
rae230bcdf |
| rae230bprobe | Biocore Data Team |
Probe sequence data for microarrays of type rae230b |
| RaExExonProbesetLocation | Raffaele A. Calogero |
Probe sequence data for microarrays of type RaEx |
| ragene10stprobeset.db | Li, Arthur |
Affymetrix Rat Gene 1.0-ST Array Probeset Revision 6 annotation data (chip ragene10stprobeset) |
| ragene10sttranscriptcluster.db | Li, Arthur |
Affymetrix Rat Gene 1.0-ST Array Transcriptcluster Revision 6 annotation data (chip ragene10sttranscriptcluster) |
| ragene10stv1cdf | Biocore Data Team |
ragene10stv1cdf |
| ragene10stv1probe | Biocore Data Team |
Probe sequence data for microarrays of type ragene10stv1 |
| ragene11stprobeset.db | Li, Arthur |
Affymetrix Rat Gene 1.1-ST Array Probeset Revision 3 annotation data (chip ragene11stprobeset) |
| ragene11sttranscriptcluster.db | Li, Arthur |
Affymetrix Rat Gene 1.1-ST Array Transcriptcluster Revision 3 annotation data (chip ragene11sttranscriptcluster) |
| rat.db0 | Biocore Data Team |
Base Level Annotation databases for rat |
| rat2302.db | Biocore Data Team |
Affymetrix Rat Genome 230 2.0 Array annotation data (chip rat2302) |
| rat2302cdf | Biocore Data Team |
rat2302cdf |
| rat2302probe | Biocore Data Team |
Probe sequence data for microarrays of type rat2302 |
| ratCHRLOC | Biocore Data Team |
A data package containing annotation data for ratCHRLOC |
| rattoxfxcdf | Biocore Data Team |
rattoxfxcdf |
| rattoxfxprobe | Biocore Data Team |
Probe sequence data for microarrays of type rattoxfx |
| reactome.db | Willem Ligtenberg |
A set of annotation maps for reactome |
| rgu34a.db | Biocore Data Team |
Affymetrix Rat Genome U34 Set annotation data (chip rgu34a) |
| rgu34acdf | Biocore Data Team |
rgu34acdf |
| rgu34aprobe | Biocore Data Team |
Probe sequence data for microarrays of type rgu34a |
| rgu34b.db | Biocore Data Team |
Affymetrix Rat Genome U34 Set annotation data (chip rgu34b) |
| rgu34bcdf | Biocore Data Team |
rgu34bcdf |
| rgu34bprobe | Biocore Data Team |
Probe sequence data for microarrays of type rgu34b |
| rgu34c.db | Biocore Data Team |
Affymetrix Rat Genome U34 Set annotation data (chip rgu34c) |
| rgu34ccdf | Biocore Data Team |
rgu34ccdf |
| rgu34cprobe | Biocore Data Team |
Probe sequence data for microarrays of type rgu34c |
| rguatlas4k.db | Biocore Data Team |
Clontech BD Atlas Long Oligos Rat 4K annotation data (chip rguatlas4k) |
| rgug4105a.db | Biocore Data Team |
Agilent annotation data (chip rgug4105a) |
| rgug4130a.db | Biocore Data Team |
Agilent Rat annotation data (chip rgug4130a) |
| rgug4131a.db | Biocore Data Team |
Agilent "Rat Genome, Whole" annotation data (chip rgug4131a) |
| rhesus.db0 | Biocore Data Team |
Base Level Annotation databases for rhesus |
| rhesuscdf | Biocore Data Team |
rhesuscdf |
| rhesusprobe | Biocore Data Team |
Probe sequence data for microarrays of type rhesus |
| ri16cod.db | Diego Diez |
GE CodeLink Rat Inflammation 16 Bioarray annotation data (chip ri16cod) |
| ricecdf | Biocore Data Team |
ricecdf |
| riceprobe | Biocore Data Team |
Probe sequence data for microarrays of type rice |
| RmiR.Hs.miRNA | Francesco Favero |
Various databases of microRNA Targets |
| RmiR.hsa | Francesco Favero |
Various databases of microRNA Targets |
| RnAgilentDesign028282.db | Biocore Data Team |
Agilent Chips that use Agilent design number 028282 annotation data (chip RnAgilentDesign028282) |
| rnu34.db | Biocore Data Team |
Affymetrix Rat Neurobiology U34 Array annotation data (chip rnu34) |
| rnu34cdf | Biocore Data Team |
rnu34cdf |
| rnu34probe | Biocore Data Team |
Probe sequence data for microarrays of type rnu34 |
| Roberts2005Annotation.db | Biocore Data Team |
Roberts2005Annotation Annotation Data (Roberts2005Annotation) |
| rtu34.db | Biocore Data Team |
Affymetrix Rat Toxicology U34 Array annotation data (chip rtu34) |
| rtu34cdf | Biocore Data Team |
rtu34cdf |
| rtu34probe | Biocore Data Team |
Probe sequence data for microarrays of type rtu34 |
| rwgcod.db | Diego Diez |
GE CodeLink Rat Whole Genome Bioarray (~34 000 rat gene targets) annotation data (chip rwgcod) |
| saureuscdf | Biocore Data Team |
saureuscdf |
| saureusprobe | Biocore Data Team |
Probe sequence data for microarrays of type saureus |
| SHDZ.db | Biocore Data Team |
SHDZ http://genome-www5.stanford.edu/ Annotation Data (SHDZ) |
| SNPlocs.Hsapiens.dbSNP.20071016 | H. Pages |
SNP locations for Homo sapiens |
| SNPlocs.Hsapiens.dbSNP.20080617 | H. Pages |
SNP locations for Homo sapiens |
| SNPlocs.Hsapiens.dbSNP.20090506 | H. Pages |
SNP locations for Homo sapiens (dbSNP BUILD 130) |
| SNPlocs.Hsapiens.dbSNP.20100427 | H. Pages |
SNP locations for Homo sapiens (dbSNP BUILD 131) |
| SNPlocs.Hsapiens.dbSNP.20101109 | H. Pages |
SNP locations for Homo sapiens (dbSNP Build 132) |
| soybeancdf | Biocore Data Team |
soybeancdf |
| soybeanprobe | Biocore Data Team |
Probe sequence data for microarrays of type soybean |
| sugarcanecdf | Biocore Data Team |
sugarcanecdf |
| sugarcaneprobe | Biocore Data Team |
Probe sequence data for microarrays of type sugarcane |
| targetscan.Hs.eg.db | James F. Reid |
TargetScan miRNA target predictions for human |
| targetscan.Mm.eg.db | James F. Reid |
TargetScan miRNA target predictions for mouse |
| test1cdf | Biocore Data Team |
test1cdf |
| test2cdf | Biocore Data Team |
test2cdf |
| test3cdf | Biocore Data Team |
test3cdf |
| test3probe | Biocore Data Team |
Probe sequence data for microarrays of type test3 |
| tomatocdf | Biocore Data Team |
tomatocdf |
| tomatoprobe | Biocore Data Team |
Probe sequence data for microarrays of type tomato |
| u133aaofav2cdf | Biocore Data Team |
u133aaofav2cdf |
| u133x3p.db | Biocore Data Team |
Affymetrix Human X3P Array annotation data (chip u133x3p) |
| u133x3pcdf | Biocore Data Team |
u133x3pcdf |
| u133x3pprobe | Biocore Data Team |
Probe sequence data for microarrays of type u133x3p |
| vitisviniferacdf | Biocore Data Team |
vitisviniferacdf |
| vitisviniferaprobe | Biocore Data Team |
Probe sequence data for microarrays of type vitisvinifera |
| wheatcdf | Biocore Data Team |
wheatcdf |
| wheatprobe | Biocore Data Team |
Probe sequence data for microarrays of type wheat |
| worm.db0 | Biocore Data Team |
Base Level Annotation databases for worm |
| xenopus.db0 | Biocore Data Team |
Base Level Annotation databases for xenopus |
| xenopuslaeviscdf | Biocore Data Team |
xenopuslaeviscdf |
| xenopuslaevisprobe | Biocore Data Team |
Probe sequence data for microarrays of type xenopuslaevis |
| xlaevis.db | Biocore Data Team |
Affymetrix Xenopus laevis annotation data (chip xlaevis) |
| xlaevis2cdf | Biocore Data Team |
xlaevis2cdf |
| xlaevis2probe | Biocore Data Team |
Probe sequence data for microarrays of type xlaevis2 |
| xtropicaliscdf | Biocore Data Team |
xtropicaliscdf |
| xtropicalisprobe | Biocore Data Team |
Probe sequence data for microarrays of type xtropicalis |
| ye6100subacdf | Biocore Data Team |
ye6100subacdf |
| ye6100subbcdf | Biocore Data Team |
ye6100subbcdf |
| ye6100subccdf | Biocore Data Team |
ye6100subccdf |
| ye6100subdcdf | Biocore Data Team |
ye6100subdcdf |
| yeast.db0 | Biocore Data Team |
Base Level Annotation databases for yeast |
| yeast2.db | Biocore Data Team |
Affymetrix Yeast Genome 2.0 Array annotation data (chip yeast2) |
| yeast2cdf | Biocore Data Team |
yeast2cdf |
| yeast2probe | Biocore Data Team |
Probe sequence data for microarrays of type yeast2 |
| ygs98.db | Biocore Data Team |
Affymetrix Yeast Genome S98 Array annotation data (chip ygs98) |
| ygs98cdf | Biocore Data Team |
ygs98cdf |
| ygs98probe | Biocore Data Team |
Probe sequence data for microarrays of type ygs98 |
| zebrafish.db | Biocore Data Team |
Affymetrix zebrafish annotation data (chip zebrafish) |
| zebrafish.db0 | Biocore Data Team |
Base Level Annotation databases for zebrafish |
| zebrafishcdf | Biocore Data Team |
zebrafishcdf |
| zebrafishprobe | Biocore Data Team |
Probe sequence data for microarrays of type zebrafish |
Bioconductor Release »
Packages in the stable, semi-annual release:
- BiocViews package discovery
- Software
- Metadata (Annotation, CDF and Probe)
- Experiment Data
- Custom CDFs (external)
Development Version»
Bioconductor packages under development:
- BiocViews package discovery
- Software
- Metadata (Annotation, CDF and Probe)
- Experiment Data
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