leeBamViews

leeBamViews -- multiple yeast RNAseq samples excerpted from Lee 2009

Bioconductor version: Development (2.8)

data from PMID 19096707; prototype for managing multiple NGS samples

Author: VJ Carey

Maintainer: VJ Carey

To install this package, start R and enter:

source("http:///biocLite.R")
biocLite("leeBamViews")    

Documentation

PDF		leeFull-dol.pdf
PDF	R Script	managing multiple NGS samples with bamViews

Reference Manual

Details

biocViews	HighThroughputSequencing, RNAseq, CellBiology, Genetics, DifferentialExpression
Depends	Biobase, Rsamtools, BSgenome
Imports	GenomicRanges, methods
Suggests	GenomeGraphs, biomaRt, org.Sc.sgd.db, edgeR
System Requirements
License	Artistic 2.0
URL
Depends On Me
Imports Me
Suggests Me
Version	0.99.11

Package Downloads

Package Source	leeBamViews_0.99.11.tar.gz
Windows Binary	leeBamViews_0.99.11.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary	leeBamViews_0.99.11.tgz
Package Downloads Report	Download Stats