Bioconductor version: 2.6
The R Genetics Project is a collaborative effort to develop a complete set of tools for storing, accessing, manipulating, and analyzing genetics data, from small candidate-gene studies consisting of a few genetic markers to large whole-genome studies containing hundreds of thousands of markers. This package (GeneticsBase) provides a foundation of efficient data structures and easy-to-use manipulation functions.
Author: Gregory Warnes <warnes at bst.rochester.edu> Ross Lazarus <ross.lazarus at channing.harvard.edu> Scott D Chasalow <scott.chasalow at bms.com> Giovanni Montana <giovanni.montana at bms.com> Michael O'Connell <moconnell at insightful.com> Junsheng Cheng <jcheng8 at users.sourceforge.net> Nitin Jain <nitin.jain at pfizer.com>
Maintainer: The R Genetics Project <r-genetics-talk at lists.sourceforge.net>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("GeneticsBase")
To cite this package in a publication, start R and enter:
citation("GeneticsBase")
CAMP_alleleSummary_html.pdf | ||
CAMP_genotypeSummary_html.pdf | ||
CAMP_LD_html.pdf | ||
R Script | HOWTO: Load Genotype Data | |
R Script | Summary Tables | |
R Script | Summary Tables | |
Reference Manual |
biocViews | Genetics |
Depends | R (>= 2.3.1), methods, combinat |
Imports | gdata (>= 2.3.0), gplots (>= 2.3.1), gtools (>= 2.2.3), graphics, grDevices, methods, stats, utils, xtable |
Suggests | GeneticsDesign, fbat |
System Requirements | |
License | LGPL |
URL | |
Depends On Me | fbat |
Imports Me | fbat |
Suggests Me | |
Version | 1.14.0 |
Since | Bioconductor 2.0 (R-2.5) |
Package Source | GeneticsBase_1.14.0.tar.gz |
Windows Binary | GeneticsBase_1.14.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | GeneticsBase_1.14.0.tgz |
Package Downloads Report | Download Stats |
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