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frmaTools
Frozen RMA Tools
Bioconductor version: 2.6
Tools for advanced use of the frma package.
Author: Matthew N. McCall <mmccall at jhsph.ed>
Maintainer: Matthew N. McCall <mmccall at jhsph.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("frmaTools")
To cite this package in a publication, start R and enter:
citation("frmaTools")
Documentation
| R Script | frmaTools: Create packages containing the vectors used by frma. | |
| Reference Manual |
Details
| biocViews | Software, Microarray, Preprocessing |
| Depends | R (>= 2.10.0), affyPLM |
| Imports | Biobase, methods, affy, preprocessCore, stats, utils |
| Suggests | frma, affyPLM, hgu133aprobe, hgu133atagprobe, hgu133plus2probe, hgu133acdf, hgu133atagcdf, hgu133plus2cdf, hgu133afrmavecs, frmaExampleData |
| System Requirements | |
| License | GPL (>= 2) |
| URL | http://bioconductor.org |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.0.0 |
| Since | Bioconductor 2.6 (R-2.11) |
Package Downloads
| Package Source | frmaTools_1.0.0.tar.gz |
| Windows Binary | frmaTools_1.0.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | frmaTools_1.0.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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