\name{getpspectra} \alias{getpspectra} \title{Retrieve a spectra-group peaklist} \description{ Extract one group from a xsAnnotate object. Returns a peaklist with annotated peaks. } \usage{ getpspectra(object,grp) } \arguments{ \item{object}{xsAnnotate object} \item{grp}{index of pseudo-spectra-group} } \details{ xsAnnotate groups LC/MS Peaklist after there EIC correlation and FWHM. These function extract one of these so called "pseudo spectra groups" with include the peaklist with there annotations. The annotation depends on a before called findAdducts() ( and findIsotopes() ). Attention: The indices for the isotopes, are those from the whole peaklist. See \code{getPeaklist()}. } \examples{ library(CAMERA) file <- system.file('mzdata/MM14.mzdata', package = "CAMERA") xs <- xcmsSet(c(file), method="centWave", ppm=30, peakwidth=c(5,10)) an <- xsAnnotate(xs) an <- groupFWHM(an) peaklist <- getpspectra(an, 1) } \author{Carsten Kuhl } \keyword{methods}